Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1649 ATGGATCATGTTATTGGTGGAAAATTCAAGCTTGGGAGGAAGATTGGGAGTGGATCGTTTGGAGAGCTTTACTTAGGTGTTAATGTGCAAAGTGGGGAGGAAGTGGCTGTCAAGCTGGAATCTGTGAAAACCAAGCACCCACAGCTTCACTATGAGTCTAAACTGTATATGCTTCTTCAAGGGGGAACTGGTATACCCCATCTAAAATGGTTTGGAGTTGAGGGTGACTACAATGTCATGGTTATTGACCTCCTTGGGCCAAGTCTTGAAGACTTGTTTAACTATTGCAATAGAAAATTATCCCTGAAAACAGTTCTGATGCTGGCAGATCAGCTAATAAACAGAGTTGAGTACATGCACTCTCGGGGTTTTCTGCATCGTGATATAAAGCCTGACAACTTTTTAATGGGCTTAGGCCGCAAGGCAAATCAGGTATACATAATTGATTATGGCCTGGCAAAAAAGTATCGGGATCTTCAAACTCACAAGCATATTCCATACAGGGAAAACAAAAATCTCACTGGAACTGCTCGGTATGCAAGTGTTAATACTCATCTGGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCTCTCGGATATGTGCTCATGTATTTTTTGAGAGGAAGTCTCCCATGGCAAGGCTTGAGAGCTGGCACCAAAAAGCAAAAATATGACAAGATAAGTGAGAAGAAGATGCTTACTCCAATAGAGGTCTTATGCAAGTCATATCCATTGGAATTCACATCATACTTCCACTACTGCCGATCATTGCGGTTTGAAGATAAGCCTGATTATTCTTATCTTAAGAGACTCTTTCGGGACCTATTTATCCGAGAAGGTTATCAGTTTGATTATGTATTTGATTGGACTATGCTGAAGTATCCTCAAATTGGATCCAGTTCTAGAGCCCGACCAAGTGGGAAACCAGTCATAAACCCAGGACAATCAGGGGAGAGAATAGAACGGCCTTCAGGTGCAGTTGAGGCATTTGCAAGGAGGAATGGCTCTGGACTTGTTCTACATAGTGAGCTTTCTAGGCATAAGTCTTCAGATGATGTGCCATCTTCCAAAGACGTGCAAGCTAATTCTGAGAGGCCTCGCAGCTCTTCTCGTAATGGCAGTTCTTCAAAAAAGCCTGTCTTGTCTAGCAGCCGGCCAAGCTCTTCTGGTGAGCCTAGTGAAAGCCGTTCTAGCCGACTGGTCTTAAGCAGTGGCCGACTATCAACAACTCAGAGACTTCAACCTGGTTTTGAATCCAAAACATCTTTATCACGGGCTTCAGCAACAAGAGGTGGTCGTGATGATACACTCAGGAGCTTTGAACTCCTGTCACTTGGTTCAGGAAAAAGGAAATGA 1359 0.4327 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLESVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKLSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLRAGTKKQKYDKISEKKMLTPIEVLCKSYPLEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTMLKYPQIGSSSRARPSGKPVINPGQSGERIERPSGAVEAFARRNGSGLVLHSELSRHKSSDDVPSSKDVQANSERPRSSSRNGSSSKKPVLSSSRPSSSGEPSESRSSRLVLSSGRLSTTQRLQPGFESKTSLSRASATRGGRDDTLRSFELLSLGSGKRK* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1649 452 MobiDBLite consensus disorder prediction 345 435 - -
Gso10g1649 452 MobiDBLite consensus disorder prediction 356 430 - -
Gso10g1649 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Gso10g1649 452 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1649 452 MobiDBLite consensus disorder prediction 299 323 - -
Gso10g1649 452 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1649 452 Gene3D Transferase(Phosphotransferase) domain 1 1 322 - -
Gso10g1649 452 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 439 - -
Gso10g1649 452 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Gso10g1649 452 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Gso10g1649 452 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1649 452 CDD STKc_CK1_delta_epsilon 8 282 - -
Gso10g1649 452 PANTHER CASEIN KINASE-RELATED 1 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1649 Gso-Chr10 43085112 43091890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1649 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 9.01e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Gso10g1649 Pkinase 3.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1649 K08960 - gmx:100790721 833.558