Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1633 ATGGAAAGCACTGTCACATTTGAGACTGATCTCAACCTCAAGGCAACCGAGCTTAGATTGGGGCTTCCAGGAACAGAAGAAATTGTTGAAAAACCACTTCCTGCAAGTGCTAGAATTACCAACAAAAGGCCTTTGTCTGAAACCTCTGAGGAGTGTGCTTCAAAGGGTTCTAGTGCTCCACATGTGGAAACTGAAGCAGCCCCTCCTGCCAAGGCTAAGATAGTGGGGTGGCCACCAATCAGATCCTACAGAAAGAACAGCCTTCAGGAGAATGATGGTGCTGGGATTTATGTGAAAGTGAGCATGGATGGAGCTCCTTACCTCAGAAAGATAGACTTGAAGGTCTATGGAGGCTACACACAACTCCTCAAAGCTCTAGAAAACATGTTCAAGTTGACCATAGGTGAGTATTCTGAAAAAGAAGGTTATAAGGGATCTGACTATGCACCTACATATGAAGACAAAGATGGTGACTGGATGTTAGTTGGAGATGTTCCATGGGACATGTTTGTGACTTCTTGCAAAAGGCTAAGAATCATGAAAGGATCAGAGGCAAGGGGTTTGGGTTGTGCTGTATGA 579 0.4473 MESTVTFETDLNLKATELRLGLPGTEEIVEKPLPASARITNKRPLSETSEECASKGSSAPHVETEAAPPAKAKIVGWPPIRSYRKNSLQENDGAGIYVKVSMDGAPYLRKIDLKVYGGYTQLLKALENMFKLTIGEYSEKEGYKGSDYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGLGCAV* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1633 192 PANTHER AUXIN-INDUCED PROTEIN 10 189 - -
Gso10g1633 192 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 10 189 IPR003311 GO:0005634|GO:0006355
Gso10g1633 192 SUPERFAMILY CAD & PB1 domains 86 181 - -
Gso10g1633 192 Gene3D - 89 192 - -
Gso10g1633 192 Pfam AUX/IAA family 42 189 IPR033389 -
Gso10g1633 192 ProSiteProfiles PB1 domain profile. 95 182 IPR000270 GO:0005515
Gso10g1633 192 MobiDBLite consensus disorder prediction 32 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1633 Gso-Chr10 42911693 42913350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1633 98 188 B3 DNA Binding Superfamily AT2G46530 37.363 6.02e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Gso10g1633 AUX_IAA 1.1e-52 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1633 K14484 - gmx:100527777 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1834 20 49003011 49005960 Gso10g1633 10 42911693 42913350 GST