Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1629 ATGGAACCGCCATTGCAGCAAAAATCGCCGCAACCGCCACCACGAACCGCCACCATCCTCGGGAAGTACCAGCTGACGCGCTTCCTCGGCCGCGGAAGCTTCGCCAAGGTCTACCAGGGGAGATCCCTCGTCGACGGCTCCGCCGTCGCCGTGAAAATAATCGACAAATCGAAAACCGTGGACGCCGGCATGGAGCCACGTATAATCCGCGAGATCGACGCCATGCGCCGCCTCCACCACCACCCTAACATCCTCAAAATCCACGAGGTGCTCGCAACCAAGACCAAGATCCACCTCGTCGTGGAGCTCGCCGCTGGCGGCGAGCTCTTCGCCAAAATCTCCCGCCGCGGAAAGCTACCGGAGTCCACCGCGCGCCGCTACTTCCAGCAGCTCGTTTCGGCGTTGCGGTTCTGCCACCGCAACGGCGTGGCCCACCGCGACCTGAAGCCGCAGAACCTCCTCCTCGACGGCGACGGAAACCTCAAGGTCTCCGACTTCGGGCTCTCCGCACTGCCGGAGCAGCTCAAGAACGGCCTCCTCCACACCGCCTGCGGCACGCCGGCGTACACCGCGCCGGAGATACTCCGCCGGAGCGGCGGCTACGACGGGTCCAAGGCCGACGCCTGGTCCTGCGGCCTCATCCTCTTCGTCTTCCTTGCCGGACACCTCCCGTTCGACGACACCAACATTCCGGCGATGTGCAAAAAAATTTCCCGACGAGATTACCAGTTCCCGGAGTGGATTTCAAAACCAGCCCGTTTTGTTATCCACAAATTACTCGACCCGAATCCGGAAACCCGAATTAGCCTGGAGTCCCTGTTTGGGAACGCGTGGTTTAAGAAATCACTAAACCCGGAAACGGCGGAAGAAAACGCGTTGGGGCTGAGTTATGTGAAGAGTAGTTATAATTACGAAGGGAGTAAAAAAAGTTCGGGAGTGACAGCGTTTGACATAATATCGATGTCTTCGGGTTTGGATTTGACGAGGTTGTTCGAAACGACGTCGGATTTGGGGAGTAAAAGAGAGAAGAGGTTTAGTTCGAGTGCGAGAGTTGAGGTGGTGGAAGAGAAAGTTAAGGAAGTGGGTGGGGTATTGGGGTTTAAGATTGAGGTTGGGAAGAGTAACGGTGCAATTGCTTTGGTGAAAGGGAAGGTGGCTTTGGTGTTTGAGGTGCTTGAGATTGTGCCTCATGAACTTCTTTTTGTGGCGGTTAAGGTGGTGGAGGGTGCGTTGGAGTTTGAGGAACATCATTGGGGGGATTGGAAAGATGCCTTGCAAGATCTCGTGCTCTCTTGGCACAACCAAGAATCGTGA 1314 0.5639 MEPPLQQKSPQPPPRTATILGKYQLTRFLGRGSFAKVYQGRSLVDGSAVAVKIIDKSKTVDAGMEPRIIREIDAMRRLHHHPNILKIHEVLATKTKIHLVVELAAGGELFAKISRRGKLPESTARRYFQQLVSALRFCHRNGVAHRDLKPQNLLLDGDGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILRRSGGYDGSKADAWSCGLILFVFLAGHLPFDDTNIPAMCKKISRRDYQFPEWISKPARFVIHKLLDPNPETRISLESLFGNAWFKKSLNPETAEENALGLSYVKSSYNYEGSKKSSGVTAFDIISMSSGLDLTRLFETTSDLGSKREKRFSSSARVEVVEEKVKEVGGVLGFKIEVGKSNGAIALVKGKVALVFEVLEIVPHELLFVAVKVVEGALEFEEHHWGDWKDALQDLVLSWHNQES* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1629 437 Gene3D Kinase associated domain 1, KA1 310 430 - -
Gso10g1629 437 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1629 437 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1629 437 SUPERFAMILY Protein kinase-like (PK-like) 19 291 IPR011009 -
Gso10g1629 437 Pfam NAF domain 314 370 IPR004041 GO:0007165
Gso10g1629 437 Gene3D Phosphorylase Kinase; domain 1 25 108 - -
Gso10g1629 437 CDD CIPK_C 314 426 - -
Gso10g1629 437 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Gso10g1629 437 PANTHER SERINE/THREONINE KINASE 15 435 - -
Gso10g1629 437 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Gso10g1629 437 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 15 435 - -
Gso10g1629 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Gso10g1629 437 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1629 437 Gene3D Transferase(Phosphotransferase) domain 1 109 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1629 Gso-Chr10 42864778 42866599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1629 4 434 Miscellaneous Gene Families AT3G23000 57.306 3.19e-167 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso10g1629 Pkinase 6.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1629 K12761 - gmx:100784173 853.203