Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso10g1628 | ATGGGAAAAAGAGATGCAGTTTGCAGGTTCAATAGTTTCAACTTTCAGGCAATAGAAAGAGTTCTTTTTACACGGTTTGAGTTGAGAATCCAGTATAGACTTTCCGCTATGGCAGCAGGATTGGAACTCATACCCATAGGTACAATTTTGACAGTGGTAACTAACCAAGTCTTGAAGACGGCTCATGCAGCATCTGATGTTCTTATTGGTAAAGAAAGCTTCAAGGCCCTTTCGACACATCTATTTGATATTGAGCCAGTGCTAAAGGAATTACAGCTTCAAGAATTGAATGACTCTCAAGCCGCAAGGGTTGCTCTGGAGTCTCTTGAAGCAGATGTTAAGAAGGCAAACAATTTGGTTGACAAGTATAGGAACCGTGGCCGTTTTTACTTACTGATTAAGTGTCGATCCATAGTTGAGGAGGTTGAACAAGTCACAAGGGATATTGGAAAGTCTCTGGCTGCATTGTCTATTGCAAATACTGAAGTCCTATCAAGAATTTCTGATCAGGTCAATAGACTACAAAATGAGATGCAAAGGGAGAAGTTTGAGGCTTCACAATCTCAGATTCAAATTGTTGACAAGTTGAACCAGGCACTTAAAGAACAGAAACATGATCAGGCTTTTGCGAACGACATGCTAAAGGAGATAGCAAGGGCAGTTGGGGTGCCAGTGGAACCCTCAGAGATAAGCAAAGAGTTGGCCAGCATTAGGAAGGAAAAAGAAGAAGCTTCCATCCGGAAAGAAAGAGCTGAATGTGTTCTTTTGGACCAGATCATTCAGTTACTCTCTCGGGCTGATGCAGCAAGGGATTATGAAGAAGTGGAGAGGCGGTACTTTGAAAGGGTTAAGGTGATAGAGAGATATGATTCAAGGGAAAAACATATCCCTCCACTCAATCCTTTCCATTGTTCTATAACCAGGAATGTTATGGTAGATCCTGTTAGCCTTTGTACCGGTACTACATGTGAACGATCTGCTATTGAAGCTTGGTTTTGTGATGGCAACAGGACAGACCCAGAAACTAAAGAGGTTCTTGAAGATACTACCTTGAGGTCTAACATTCCACTAAGACAATCCATTGAAGAGTGGAGAGAACTTAATTACTGTCTGGTCATAAGGTCTATTAGGGAAAACTTGTTATCATATTCTGACCTGCAAGAATCCCTGAGCCAAATGCAGACTCTAGTAAGAGAGAATTCGATTAACAAGGATTGGATTTCTATAGCAGAGCTTACTGACATTGTGATCTCTATCCTTGGGAGCTCTGATGACAGAGAAGTGAAGATGAAGATTTTGATAACTTTGAAGGATGCTGTAGAGGGGAATACAAGAAACAAGGAGAAAGTGGCTGAATCTCAAGGATGGGATAACATTATTTCCTGCTTAGGGAGTGACTCTAGCACTTCAAAGGCAGCTATTGATTTGCTACATGAGTTGCTTCAAGAACAATCCGGGTGGAATGAATGTCTCTGCAGAAAGCTTTCTGAAAATCGCACTGCAGTTCAGTTCCTTGTTGCCCTTCTGAAGAATCATGTCAATCATTCTGCTGAGGTTGCAGAAAACATTTTGATGAATCTTTTTGAACTAAATGATGAAACCATTACTATTGCTGCTAATTTTGGCTGGTATAAACCACTTGTTGATCGCATGATTCAAGGACCAGATTCAAGAATATCAATGACAAAAGCCATAGTTAATTTGGAGTTGAAGGATCCAAACTTAAAACTCCTTGGCAAGGAAGGAGCTATACCTCCTTTGCTAGAAATGCTGTCAGGCAATATTGAATCAAAAGACTTGTCGTTATCAGCCCTGGTTAAATTAGCAGGATCTCATGCCAATAAGGGAATTATTGCTGCATCTGGAGGAGTCCCTCTTATTATAGATTTAATGTTCTCTCCTCAGTCACGGACACTAATTATCATTAAATGTTCTGAAATCATTGAGAAGCTTTCTTCTGATGGTGATGGAATTGATTTCTTTGTTGATGGAGAAGGGAAACAACTTGAGTTGGATTCCATCATCGCCAATTTGCTAGCTTTGCAGCAGACTTCCAACTCAGGTCACAACATCCGTAAGCCTGCACTGAGTGCACTTCTTGGAATTTGCAAGTTTGAGACTGGTTTGGTTAAGAAAGCAATTCTTGCAGCCAATGGTGTATCTCTAATTCTCCCACTCCTTGATGATTCTGACTCAGAAATCAGGGAGACTTCCATAATTCTGCTCTTTCTTTTCTCTCAACATGAGCCGGAAGGAGTAGTTGAATACCTCTTCAGGCCTAGAAGGCTTGAAGCCTTGATTGGATTTCTTGAGAATGAAGAAAATGCCAATGTGCAGATAGCTGCTGCTGGTTTACTGGCTAACCTGCCAAAATCCGAAAGAGAACTCACTATGAAGTTGATTGAGTTGGGTGGACTCGATGCAATCATAAGCATTTTGAAAACTGGGAAAATGGAAGCAAAAGAAAATGCTCTCACTGCACTCTTCAGGTTCACAGACCCTACAAATATCGAGTCACAACGAGATCTGGTTAAGCGCGGAATATACCCTTTGCTTGTAGATTTTCTCAACACTGGTTCAGTCACAGCAAAAGCAAGAGCAGCAGCATTCATTGGTGATCTTTCTATGAGCACTCCAAAACTCACAGTTGTTCCCAAACCAACTGGTTGCTGGCTTTTCAGATCATCGCGTGTTCCGTTATGTTCAGCACATGGGAGTGTATGCAGTGTGAACACCACATTTTGTCTTTTAGAAGCAAAGGCTTTACCTGGCTTGATAAAGCTGTTACATGGGGAGGTTCATGCAACTGCTTGTGAAGCAATACAAACACTCTCCACATTGGTTTTGGAAGATTTTCCTCAAAGGGGAGCTCGTGTCTTGCATGAATATAATGCAATAAGGTCCATAATGGACATTTTGAACTGGGGAACTGATTCTCTAAAGGCAGAAGCTCTAGGACTGTTGGAGAAGGTGTTTGTGTCAAAGGAAATGGTAGAATACTATGGAACAACAGCTAGATCACGTTTAATTGGTCTCACTGGCATGAATATATATGGGGATGGACACCTTAGGAGAAAAGCTGCCAAGGTACTATCATTGCTTGAACGCTACTCAAAGTCATCATCATCTGCAATCTCAGGAGTTCCGGAGTGA | 3153 | 0.4139 | MGKRDAVCRFNSFNFQAIERVLFTRFELRIQYRLSAMAAGLELIPIGTILTVVTNQVLKTAHAASDVLIGKESFKALSTHLFDIEPVLKELQLQELNDSQAARVALESLEADVKKANNLVDKYRNRGRFYLLIKCRSIVEEVEQVTRDIGKSLAALSIANTEVLSRISDQVNRLQNEMQREKFEASQSQIQIVDKLNQALKEQKHDQAFANDMLKEIARAVGVPVEPSEISKELASIRKEKEEASIRKERAECVLLDQIIQLLSRADAARDYEEVERRYFERVKVIERYDSREKHIPPLNPFHCSITRNVMVDPVSLCTGTTCERSAIEAWFCDGNRTDPETKEVLEDTTLRSNIPLRQSIEEWRELNYCLVIRSIRENLLSYSDLQESLSQMQTLVRENSINKDWISIAELTDIVISILGSSDDREVKMKILITLKDAVEGNTRNKEKVAESQGWDNIISCLGSDSSTSKAAIDLLHELLQEQSGWNECLCRKLSENRTAVQFLVALLKNHVNHSAEVAENILMNLFELNDETITIAANFGWYKPLVDRMIQGPDSRISMTKAIVNLELKDPNLKLLGKEGAIPPLLEMLSGNIESKDLSLSALVKLAGSHANKGIIAASGGVPLIIDLMFSPQSRTLIIIKCSEIIEKLSSDGDGIDFFVDGEGKQLELDSIIANLLALQQTSNSGHNIRKPALSALLGICKFETGLVKKAILAANGVSLILPLLDDSDSEIRETSIILLFLFSQHEPEGVVEYLFRPRRLEALIGFLENEENANVQIAAAGLLANLPKSERELTMKLIELGGLDAIISILKTGKMEAKENALTALFRFTDPTNIESQRDLVKRGIYPLLVDFLNTGSVTAKARAAAFIGDLSMSTPKLTVVPKPTGCWLFRSSRVPLCSAHGSVCSVNTTFCLLEAKALPGLIKLLHGEVHATACEAIQTLSTLVLEDFPQRGARVLHEYNAIRSIMDILNWGTDSLKAEALGLLEKVFVSKEMVEYYGTTARSRLIGLTGMNIYGDGHLRRKAAKVLSLLERYSKSSSSAISGVPE* | 1051 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso10g1628 | 1050 | Coils | Coil | 234 | 254 | - | - | |
| Gso10g1628 | 1050 | SUPERFAMILY | ARM repeat | 670 | 1038 | IPR016024 | - | |
| Gso10g1628 | 1050 | ProSiteProfiles | U-box domain profile. | 297 | 371 | IPR003613 | GO:0004842|GO:0016567 | |
| Gso10g1628 | 1050 | Gene3D | - | 384 | 541 | IPR011989 | - | |
| Gso10g1628 | 1050 | Gene3D | - | 45 | 161 | IPR036537 | GO:0007166 | |
| Gso10g1628 | 1050 | Coils | Coil | 99 | 126 | - | - | |
| Gso10g1628 | 1050 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 281 | 371 | IPR013083 | - | |
| Gso10g1628 | 1050 | Pfam | U-box domain | 302 | 366 | IPR003613 | GO:0004842|GO:0016567 | |
| Gso10g1628 | 1050 | SUPERFAMILY | ARM repeat | 415 | 751 | IPR016024 | - | |
| Gso10g1628 | 1050 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 43 | 1047 | - | - |
Showing 1 to 10 of 24 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso10g1628 | - | - | gmx:100783638 | 1935.61 |
Showing 1 to 1 of 1 entries