Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1612 ATGGAGTTTTCAGTACTACCACTTTTGTATTCTCTTGTGTTTCTTCTCTCAAACCCAACATGGGTGTGTGGGAATGGAGAGTTGAGAGCACTGATGGATATGAAGGCCAGTTTGGACCCAGAGAGCCTCTATCTACCCTCTTGGAGTATCAATGGTGACCCATGTGATGGATCTTTTGAAGGAGTAGCATGCAATGAGAAGGGTCAGGTGGCAAACATTTCTCTGCAGGGAAAGGGTCTCTTTGGGAAGCTTTCAGCAGCCATTGCTGGCCTAAAGCACTTGACTGGACTCTACTTGCATTATAACTCTTTGTATGGAGAGATACCAAGAGAGATTGCAAACTTGACTGAGCTTGTTGATTTGTATTTGAATGTGAATAATCTGTCCGGGGAAATCCCTCGTAAGATCGCCAGCATGGAGAACTTGCAAGTTTTGCAGCTTTGTTATAATCAGTTGACAGGAAGCATTCCTACACAGCTTGGTGCTTTGGAAAAGCTGAGAGTTGTTGCTTTGCAGTCTAACAATTTAACTGGTGCCATCCCTGCTAATCTAGGTGAATTGGGTATGCTGGTGAGGCTAGATTTGAGCTCTAATAATCTCTTTGGTTCCATTCCCACTAGCCTAGCTGATGCTCCTTCACTGAAGGTTTTGGATGTTCACAACAATACCCTTTCTGGGAATGTACCTCCTGCTCTTAAGAGACTAGATGATGGATTTCTGTATGAATACAATCTGGGGTTATGTGGAGTTGGGTTTTCATCCCTGAAAGCTTGCAATGCTTCGGATCATGTTAATCCTAGCAGACCTGAACCTTATGGAGCAGCCACAAGAGATATCCCAGAAACTGCTAATGTGAAGTTACCTTGCAGGGGAGCTCAGTGCCTTAATTCATCAAAATCCAATCAATCCACATCAATTACAGTTAGCATATTTGTGGTTATGATTGCACTGTGTGCAATTGGTGTTTTGACATTCACAATATATCGTCGAAGAAAACAAAAGCTTGGAGATTCTTTTCATATCAGTGACAGTCATCTAAGCACTGATGAAGCCATTGGTGCATATAGGAAAAATGGATCTCCTTTGGTCAGTCTTGAGTACTCTACTGGATGGGACCCTTTGGCTGATAGTAGGAATTTCAATGGCTATAGTCAAGAGATGTTCCAGAGTTTGAGGTTCAACTTGGAGGAAGTGGAGTCAGCTACTCAGTATTTCTCAGAGTTGAATCTGTTGGGTAAGAATAGCTTTAGTGCAACTTATAGAGGAGTTTTAAGAGATGGATCTGTTGTTGCTGTGAAGAGCATCAGCAAAACTAGTTGCAAGTCGGATGAAGGCGAGTTTATGAAGGGATTGCACATGTTGACCTCACTGAGGAGTGATAATGTAGTGAGGTTGAGAGGATTTTGTTGTTCAAGGGGACGAGGCGAATGCTTTCTGATTTATGATTTTGTTCCTAATGGAAACCTTTCACGCTTCCTTGATGTTAAGGAAGGAGATGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATGGCATATTTGCATGCATACAAAGCAAACAAGCCCGTTTTGGTTCACCAAAACATCTCAGCTGACAAAGTTCTCATTGATCAACGGTACAATCCATTGCTAGCAGATTCTGGCCTGTACAAGCTTCTCACTAACGATATTGTCTTCTCTGCACTCAAGGGAAGTGCAGCAAAGGGTTACTTGGCGCCTGAATACGCCACAACTGGCCGCTTTTCTGAGACAAGCGATGTTTATGCTTTTGGGGTGATGCTTTTCCAGATCCTTTCAGGGAAGCACGAGATTACTAGCTCAATAAGACTTGCTGCAGAGTCCTCCAAGTTCCAAGAATTTATGGACCCAAATCTCCATGGAAGATACTTCGAATATGAAGCAGCTAAACTGGCAAAGATAGCTTTGCTTTGCTCCCATGAGTCTCCTTTTGAGAGGCCATCCATGGAAGGCATTGTTCAAGAACTGGGGAATTGTAGTAGCTGTTTCTGA 2034 0.4292 MEFSVLPLLYSLVFLLSNPTWVCGNGELRALMDMKASLDPESLYLPSWSINGDPCDGSFEGVACNEKGQVANISLQGKGLFGKLSAAIAGLKHLTGLYLHYNSLYGEIPREIANLTELVDLYLNVNNLSGEIPRKIASMENLQVLQLCYNQLTGSIPTQLGALEKLRVVALQSNNLTGAIPANLGELGMLVRLDLSSNNLFGSIPTSLADAPSLKVLDVHNNTLSGNVPPALKRLDDGFLYEYNLGLCGVGFSSLKACNASDHVNPSRPEPYGAATRDIPETANVKLPCRGAQCLNSSKSNQSTSITVSIFVVMIALCAIGVLTFTIYRRRKQKLGDSFHISDSHLSTDEAIGAYRKNGSPLVSLEYSTGWDPLADSRNFNGYSQEMFQSLRFNLEEVESATQYFSELNLLGKNSFSATYRGVLRDGSVVAVKSISKTSCKSDEGEFMKGLHMLTSLRSDNVVRLRGFCCSRGRGECFLIYDFVPNGNLSRFLDVKEGDGEVLEWSTRVSIVKGIAKGMAYLHAYKANKPVLVHQNISADKVLIDQRYNPLLADSGLYKLLTNDIVFSALKGSAAKGYLAPEYATTGRFSETSDVYAFGVMLFQILSGKHEITSSIRLAAESSKFQEFMDPNLHGRYFEYEAAKLAKIALLCSHESPFERPSMEGIVQELGNCSSCF* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1612 677 SUPERFAMILY L domain-like 23 233 - -
Gso10g1612 677 Gene3D Phosphorylase Kinase; domain 1 374 483 - -
Gso10g1612 677 Gene3D Ribonuclease Inhibitor 21 273 IPR032675 -
Gso10g1612 677 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 675 - -
Gso10g1612 677 ProSiteProfiles Protein kinase domain profile. 405 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1612 677 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Gso10g1612 677 Pfam Protein tyrosine and serine/threonine kinase 409 670 IPR001245 GO:0004672|GO:0006468
Gso10g1612 677 Gene3D Transferase(Phosphotransferase) domain 1 484 676 - -
Gso10g1612 677 SUPERFAMILY Protein kinase-like (PK-like) 379 670 IPR011009 -
Gso10g1612 677 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 5 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1612 Gso-Chr10 42645369 42648676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1612 8 518 Miscellaneous Gene Families AT4G22730 56.190 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Gso10g1612 PK_Tyr_Ser-Thr 2.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1612 - - gmx:100775422 1340.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1643 16 37126291 37130123 Gso10g1612 10 42645369 42648676 PCT
Gso9g1272 9 36277155 36281097 Gso10g1612 10 42645369 42648676 PCT
Gso10g1612 10 42645369 42648676 Gso16g1643 16 37126291 37130123 PCT
Gso10g1612 10 42645369 42648676 Gso9g1272 9 36277155 36281097 PCT