Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1611 ATGGCTTCCCTGGCGGCTTCCACCGCGGCTATGTCAGAAATCCTTGGAAACCCCGTTAACCTCAGATGCGCAACCAGGTCTGCTCCATCACCAACTACACCTGCCACCTTCAAGACCGTCGCACTTTTCTCCAAGAAGAAGCCAGCTCCACCTCCAAAGAAAAAGCCTGCCGCTGTATCCCCCGCCAATGAGGAACTCGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCTGAGGGTCTCTTGGACCGATCTGAGATCCCCGAGTACTTGACCGGAGAAGTGCCTGGAGATTATGGTTATGATCCGTTTGGTCTTAGCAAGAAGCCAGAGGACTTCGCCAAGTACCAGGCGTTTGAGTTGATTCATGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTTAACAAATACGGAGCTAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACTGGAGCTTTGCTTCTTGATGGGGGTACATTGAACTACTTCGGGAAACCTATCCCCATCAATCTTATTCTTGCTGTTGTTGCTGAGATAGTTCTTGTGGGTGGTGCTGAGTACTACAGAATTATTAATGGCCTGGACTTGGAAGACAAGCTTCATCCGGGTGGTCCATTCGACCCATTGGGACTAGCAAAGGATCCAGACCAAGCTGCACTTCTAAAGGTGAAGGAAATTAAGAATGGTAGACTAGCTATGTTTGCAATGCTTGGTTTCTACTTCCAAGCATATGTCACTGGAGAAGGTCCAGTTGAGAACTTAGCAAAACATCTCAGTGACCCTTTTGGTAACAACTTGCTCACTGTGATTGCTGGCTCCGCTGAGAGGGCTCCAACTCTGTAA 864 0.4931 MASLAASTAAMSEILGNPVNLRCATRSAPSPTTPATFKTVALFSKKKPAPPPKKKPAAVSPANEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLILAVVAEIVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSAERAPTL* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1611 287 SUPERFAMILY Chlorophyll a-b binding protein 68 278 - -
Gso10g1611 287 Gene3D Chlorophyll a/b binding protein domain 76 287 - -
Gso10g1611 287 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 287 - -
Gso10g1611 287 Pfam Chlorophyll A-B binding protein 89 250 IPR022796 -
Gso10g1611 287 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 287 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1611 Gso-Chr10 42631447 42634333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1611 1 287 Chloroplast and Mitochondria Gene Families AT4G10340 81.944 1.62e-152 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1611 K08916 - gmx:100820327 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1611 10 42631447 42634333 Gso10g1611 10 42631447 42634333 ECH
Gso16g1644 16 37140529 37143374 Gso10g1611 10 42631447 42634333 PCT
Gso9g1273 9 36296807 36299580 Gso10g1611 10 42631447 42634333 PCT
Gso10g1611 10 42631447 42634333 Gso16g1644 16 37140529 37143374 PCT
Gso10g1611 10 42631447 42634333 Gso9g1273 9 36296807 36299580 PCT