Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1605 ATGGCTTCAATGAATAACCAAAAAGAAATTGAGCTCTTTGAGGGCCAATCTCTTTTGTACATGCAGTTATATGGCAACCTAAGAACTATGTGTCTTGAGTGGGTTGTGCAACTTGGTATTCCAGACATAATACACAATCATGGAAAACCCATTACTCTTTCTGAGTTGGTCTCAACTCTCCAAATTCCACCACCTAAGGCTGGTTTTGTGCAGCGGTTCATGCGTTTTTTGGTACTCAATGGAATATTTGATACCCATGAGAGCCAAGAAGATCATGAATTAGCATATGCTCTAACCCCTACTTCAAAGCTTCTTGTCAGTAGCAGTGACCACTGTTTATCTCCAATGGTTCGGGTCAATACTGATCCACTTCTGATGGGTGCATTCCATCACTTTGTTGAATGGATTCGTGGGGACGACCCCTCAATATTTGAGACAGTCTTCGGAACAAGCATTTGGGAATATTTTGAGAAGAAACCTGCATATATGAGTCTCTTCAACGAGGCTATGGCAAGTGATTCCCAAATGGTAGGCTTGGCACTCAAAAATTGCACTTCAGTTTTTGAGGATCTGGATTCCATGGTGGATGTAGGTGGTGGAACTGGAACCACCGCAAGAAATATCTGTGACGCATTTCCTAAGCTGAAATGTGTTGTGCTTGACCTTCCTCATGTTGTAGAAAACTTGACAGCAACCAATAATTTAAGTTTTGTTGGTGGTGACATGTTCAAATCTATCCCTCAAGCTAGTGCAGTTCTACTAAAGTGGGTTTTACATGATTGGGATGACGAAGATTGCATAAAGATCCTGGAAAAGTGTAAAGATTCTATTTCAAGCAAAGGCAACGGAGGGAAAGTGATTATCATAGATACAGTGATAAACGAGAAGCTAGATGACCCGGATATGACTCAAACAAAGCTTAGTTTGGATATAATAGTTATGTTGACTATGAATGGAAAAGAACGAAGTGAAAAAGAATGGAAACAACTCTTCACTGAAGCAGGATTCAAACACCACAAAATATTTCCCATCTTTGGTTTTAGATCTCTAATTGAGGTCTATCCATGA 1068 0.4007 MASMNNQKEIELFEGQSLLYMQLYGNLRTMCLEWVVQLGIPDIIHNHGKPITLSELVSTLQIPPPKAGFVQRFMRFLVLNGIFDTHESQEDHELAYALTPTSKLLVSSSDHCLSPMVRVNTDPLLMGAFHHFVEWIRGDDPSIFETVFGTSIWEYFEKKPAYMSLFNEAMASDSQMVGLALKNCTSVFEDLDSMVDVGGGTGTTARNICDAFPKLKCVVLDLPHVVENLTATNNLSFVGGDMFKSIPQASAVLLKWVLHDWDDEDCIKILEKCKDSISSKGNGGKVIIIDTVINEKLDDPDMTQTKLSLDIIVMLTMNGKERSEKEWKQLFTEAGFKHHKIFPIFGFRSLIEVYP* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1605 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Gso10g1605 355 Pfam O-methyltransferase domain 129 337 IPR001077 GO:0008171
Gso10g1605 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 354 IPR029063 -
Gso10g1605 355 SUPERFAMILY "Winged helix" DNA-binding domain 11 109 IPR036390 -
Gso10g1605 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 355 IPR016461 GO:0008168
Gso10g1605 355 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Gso10g1605 355 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 354 - -
Gso10g1605 355 PANTHER O-METHYLTRANSFERASE 2 354 IPR016461 GO:0008168
Gso10g1605 355 Gene3D Vaccinia Virus protein VP39 107 355 IPR029063 -
Gso10g1605 355 Gene3D - 1 105 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1605 Gso-Chr10 42586163 42587625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1605 17 341 Monolignol Biosynthesis Gene Families AT5G54160 33.033 3.96e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1605 K22588 K13262 gmx:100819257 724.546