Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1577 ATGGGGAGCGGGAGCAGAAGCTACTCGGCCAACCCCGCCGACTACAAGCTTCTAGAAGAAGTCGGTTACGGCGCCAGCGCCACCGTGTACCGCGCAATCTACCTCCCTTACAACGAAGAGGTCGCCGTGAAGTGCCTGGATCTGGATCGCTGCAACAGCAATCTGGACGACATAAGAAGAGAAGCGCAGACCATGAGCCTAATCGAGCACCCCAACGTCGTGAGGGCTTTCTGCTCCTTCGTCGTGGAGCGGAGTCTGTGGGTTGTGATGGGATTCATGGCGCAGGGCTCCTGCCTGCACCTCATGAAGGCTGCGTATCCCGAGGGATTCGAAGAGGCCGCCATCGGATCTATCCTCAAGGAGACTCTCAAGGCGTTGGAGTATCTCCATCGACACGGACACATTCACCGCGACGTTAAGGCCGGGAATATTCTTCTTGACGATAACGGCCTGGTCAAGCTCGCTGACTTTGGTGTTTCCGCTTGCATGTTCGACACCGGCGACCGCCAGCGCTCCAGAAACACCTTCGTCGGAACTCCGTGCTGGATGGCGCCGGAGGTGCTGCAACCTGGAACCGGTTACAATTTCAAGGCGGATATTTGGTCGTTTGGGATTACGGCGTTGGAGTTGGCTCATGGTCACGCGCCTTTCTCCAAGTATCCTCCCATGAAGGTTCTTTTGATGACCATTCAGAATGCTCCTCCGGGGCTTGATTATGATCGTGATAGAAAGTTCTCCAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAACAAAGAGGCCATCTGTGGAGAAGTTACTCAAACACTCCTTCTTCAAACAAGCTAAGCCACCGGAGCTTTCTGTAAAGAAATTATTTGCTGATTTACCGCCTTTGTGGAACCGTGTAAAATCCCTCCAGCATAAAGATGCAGCCGAGCTAGCACTAAAGAAAATGCCTTCTGCAGAACAAGAAGCTATATCTCAAAGTGAATATCACCGAGGAGTTAGTGCATGGAACTTCGATATTGATGATTTGAAAGCACAAGCGGCATTGATGCAGGACGATGATGATATTGCAGAGATGAGGGAAGAAGATGAAAACAAATTCTTCAGCTTTTACAAGGGCACAACTGATTCCCAGTTTATTGTGGACAAAAAGAATTCAAATAACTTGCAACAAGATGAGTTCACATCACAAGTAGGTAGTAATGACATACCAAAGAGTGAGAAAAGAAATGGATCAGTTGCTGAAGCAACACCATCTACTTTAGAGAATGATGTGGGAACAAGCAAAGTTAAAACTCAATCAGTGAAACTTGGTAAAACCCAAAGTGGACCCCTGATGCCAGGCTTAGTGCTTGGCCATTCTTCATCTGAAAGAGGGCGTACATTTGAAAGGTTTGAGAATGAAAATCAGTTATTGGGTGAGAAAAGTAATCGTGATATACGACGAGCTCCAAGCTTTAGTGGTCCATTAATGCTTCCAAACCGAGCTTCAGCAAATAGTTTATCAGCCCCAATCAAATCTTCTGGAGGATTCAGAGATTCCTTGGATGATAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGACGATTTTCAGTGACATCAGAAAATTTAGATCTGGTGAAGGATATTCCTGTAAGTTCAGTTTCACGCCGATCTTCACAGGGATCACCAATGAGGAAATCTGCGAGTGTTGGTGATTGGATGGTGGATTTCAAACAAATGCAGTCTTCCAATGATTCTGCCAATATCAATATTCCTGCATCACTTCTAGTGCCTCATCTTCACAATCTTTTTCAGCAGACATCTATTCAACAGGATCTTATAATGAATCTGTTGAATAGCTTGCAAACTGCCGAGGCAATTGATACTTCTCAGAATGGAAAGTTACCACCATTACCTCGCAATTCAGAGAACAATGGAAGTGTTGATACAGCAGTTTCAGAGAGGGAACAACTACTGCTGGGCAGAATTTCAGAACTCCAATCCCGGATGATTAATTTGACCGAGGAACTGACTTATGAGAAGTTAAGATACGTGCAGTTGCAACAACAGCTTGCTCTCTACAGCCAGGAACAAAATGGGGAAAGAGAGGAATTTGCATGA 2103 0.4593 MGSGSRSYSANPADYKLLEEVGYGASATVYRAIYLPYNEEVAVKCLDLDRCNSNLDDIRREAQTMSLIEHPNVVRAFCSFVVERSLWVVMGFMAQGSCLHLMKAAYPEGFEEAAIGSILKETLKALEYLHRHGHIHRDVKAGNILLDDNGLVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPSVEKLLKHSFFKQAKPPELSVKKLFADLPPLWNRVKSLQHKDAAELALKKMPSAEQEAISQSEYHRGVSAWNFDIDDLKAQAALMQDDDDIAEMREEDENKFFSFYKGTTDSQFIVDKKNSNNLQQDEFTSQVGSNDIPKSEKRNGSVAEATPSTLENDVGTSKVKTQSVKLGKTQSGPLMPGLVLGHSSSERGRTFERFENENQLLGEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQGSPMRKSASVGDWMVDFKQMQSSNDSANINIPASLLVPHLHNLFQQTSIQQDLIMNLLNSLQTAEAIDTSQNGKLPPLPRNSENNGSVDTAVSEREQLLLGRISELQSRMINLTEELTYEKLRYVQLQQQLALYSQEQNGEREEFA* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1577 700 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 691 - -
Gso10g1577 700 CDD STKc_OSR1_SPAK 14 276 - -
Gso10g1577 700 Pfam Protein kinase domain 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1577 700 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Gso10g1577 700 Coils Coil 678 698 - -
Gso10g1577 700 Gene3D Phosphorylase Kinase; domain 1 4 91 - -
Gso10g1577 700 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1577 700 MobiDBLite consensus disorder prediction 623 644 - -
Gso10g1577 700 MobiDBLite consensus disorder prediction 394 450 - -
Gso10g1577 700 MobiDBLite consensus disorder prediction 394 440 - -
Gso10g1577 700 SUPERFAMILY Protein kinase-like (PK-like) 14 330 IPR011009 -
Gso10g1577 700 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 691 - -
Gso10g1577 700 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1577 700 Gene3D Transferase(Phosphotransferase) domain 1 96 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1577 Gso-Chr10 42248201 42258204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1577 6 689 MAP Kinase Kinase Kinase Kinase AT4G24100 65.801 0.0 908
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gso10g1577 Pkinase 7.5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1577 - - gmx:100811264 1376.3