Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1572 ATGAAAGGGGGGCGATCGCACCGCCCTCAGAGCTCTGACCCGCCGGACGAGTGGGTGGACGGGTCCTGGACGGTGGACTGCATCTGCGGCGTCACCTTCGACGACGGCGAGGAGATGGTCAAATGCGACGAGTGCGGCGTGTGGGTCCACACGCGCTGCTCTCGCTACGTCAAGGGCGACGACACCTTCGCATGTGACAAGTGCAAGGCCAGGCACAACAGCAACAGCAACAACACCACCACCACCACCACCAACACCACCAACCCCATGGAGACCGAGGTGGCGCAGTTCCTCGTGGAACTCCCCACAAAAACCATTTCCATGGACAACAAAAAAGCCCTCCCCTCCAGGCCCAGGCTCTGGACCGATAAGCCCATCGAGGAGCGGGTCCATGTTCAGGGCCCACCGGGCGGAGACCCTTCCATCTTCGCTGGCCAAAGCGCCTCCTCGATTTTCACGCCCCAGCTCTGGAAGGCATGCGGGTATGTCCCTAAGAAGTTCAGTTTTAAGTACAATGAGTTCCCTTTCTTGAATAATGATAACGATAACGAGGGCGGGCCAGCAAAAGATGATAGTAACGATAATGGGGCTGGTGCTGGGGCTCTTGTTTCTCTGTCCAAAGAGGGTAACAACATTGCTTCTGCTGCTCCTGTGTTGAACACTTCTTCCCCTGTTGGGGCTTCGGTTGAAACGAGATCTGGCCAGGGCAAGGGCGCGGACACGGGCAAGTTTGGGAGCGAGGACGTGCCACCACGTGTCCCCAGTGACGTCAAGAAGGAGAGGACTCTGCTGAGGCCACCTGTTGTTCATAACAGTCAGCGTAGCAAAGGGGATTTCGTCGGGAATTCGAGTTCCAAGGAGAGGAGTGGGAAGAAACGCCTTAGGACTTCTGACAGGGAGGTAGATCCCAGGAAGAAAACGCTGCATTCCTCCAAAACAGTGGTTACGCCCACCGCTGATGGAAAGCAATTGGAATTTTGTGAGGATAGAGGATCAAAGATTTTCAAGGCTGACACTCGGAGCATAAAGAACAAAAACTTAAAAGACATGGTGGTTCAAGAACATGTTTCTGATGATCATGTAGCTGTGGATACTACCATGGAGGAGCCAAATAACAACTTAACAACTACCGAGGACTCCTCAGAACCATTATATCCTGACATGACTAAACATGGTGTTTCTGTTGGAGATGTTGTAGCAGAAGAGAAGGCTAGCCATAAAACTCCTACTTTGGTTGAGATGTCTTCCAAGACTGATGATGCTGTTACATCATCTTTAAAGCAGAACTATGTTGGAAATGCTTCAGTTAAAGAAAAGGATGGAGATTGCTTGGTAGCTGATAACGCAGACGATACTTTAGTAGTAAGAAGTGCAGCAAGTCCTCGCACAGAAGGTCATTGTGGTTCTGCACCAGAACTTGTGGATAACCAAGTTTCTCAAGATCTTGACCGTAACATGCGTTCTAGCTCTACAAAATGCAAAGTTAAGATGAGGAGAGATGATGTTGATAATTTTAGGAAGCCCTCAAATTTTCATTCTTCTCCTATGAGTGATCTAAAAAACAATGATAAACCTTCTGACCACACTTCTGATATTGTTAAAGTGAATGATGCTCCAGTTCCCAGTTTACCATCATGTGAAAGTAAGGTGGGTGGTTTTGATATTTCATCAGAACCAATACCTGCTGATCATACCAATAAACCCAATGAATTATCTGGTGATTTTTGTCAAAGAAAACAGGATCCGGTGGGGTCTGAAGGTTCCTTCGAAACACAAAAGGGATTTACAGAAACAAAAGACAGTTTGGATGCTGCTAAAGATCCATCAAAATCCGAAGCAATTGGATGTCTGCCTAAAGTTGGAAAGTCATCTCCAACTTCATCAACCATGAACTCCAAATCATTGGGTCATGACATCAAATCTGAAGATACTGAAATCCCTAATTCTTTTACGAAGCATGGAGTGATGGCTGATAGTAACATTCACACAAAGAATGAAAATTGTCCAAGTGATGCTGCCAGGGATGAAAATCAAAAGAAGTCTGTAAAAGAGCGACCAAAATCCTCTTTGAATTCGAATTCAAAAGGATTGCAGTCAAGCAGGAGTATGCAAAATTCTGTCCCAAAGCAAGTGAATTCAGATGCCAGAGATTCTGTTCATGTTTCATCTTCTAAACCTTTGATACATCAGACTGCAAGTATATTAGGCTCTAGTGAGTCTAATGCATCATTGCACCATCAGAAGGTTTTACAAGTGCAGAATAAGATTTCATCTTCAGCGCCACAGAAAGTTGAAAAACTTAACCAAACAAACATCCACACTTCCTCCAAGTTGAATCAAAGTCATGTATCATCAGTGAATCCTTCTCCAATATCGAATTCTTCAATGCTGAGTGATGAAGAGCTTGCTCTTCTATTGCATCAAGAACTGAATAGTTCTCCTCGTGTACCTCGTGTGCCCCGAGCACGCCATGCAGGTAGCTTGCCCCAGTTGACTTCTGCTAGTGCTACAAGCATGCTAATGAAGCGAACATCGGGTGGAGGAAAGGATCATTATTTGGTATCTAGACGAAAACACAAGGATGCATCTAGACCTGGGTCTGGCAGTTCTCGTGAACTTGAAGATGAAGCTAAAAAGATAGAGAAGGAGAAGGGTCCATCCTCGTCTGATCAGAGGAAACTAGATATGTCATATGTGGAAGATGCTCCTGCAAGGGAAGAAGGCCTTGCATCTATGGCAGTGACAAACTCCATCACAAACAATACTGTTTCTTCCACCTCTGGAATTGCAAACAGCGATGCATCCTCCCCTCCGGAGGATCAGAATTTGTCATCTATGCGTAACTCACCTAGGAATGTATCTGATGATGATACAGCAACTGCTGGAAGGCCAGTTCATCGCACCTTACCTGGTTTAATCAATGATATTATGAGCAAAGGCAGGCGTATGACATATGAGGAACTCTGTAATGCTGTGCTACCGCACTGGCATAACTTGAGGAAGCATAATGGAGAGCGTTATGCATACTCAAGTCACTCTCAGGCTGTTCTTGATTGTTTGAGGAACCGGCATGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGACAAATTCTAATAGGAAAAGGCGTAAACTGGATGCGGAAGAGTCTGATGATAACGGATATGGTAAGGGAAGAACTGCAAAAGATGTTGAAGGGAAGAACTTTGAGTTGCAAAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCTCGAAAACGTAGGCGCCTTGCTCTTCAGGGAAGAGCAGTGAAGGATGTCAGGAGGAGACAGAAAGTTAGCTCGCTAACGGATGAGGATCTGGGTCCATTCTCCAATTCTAGTGAAGAGAGCATGTTCAGTGAAGATGAAATTCAGGCTGGCAGAATTTGTCCTGCTGGAAGTTCATCAGATGAGGCAGGTAGTGCCTAA 3447 0.4607 MKGGRSHRPQSSDPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGDDTFACDKCKARHNSNSNNTTTTTTNTTNPMETEVAQFLVELPTKTISMDNKKALPSRPRLWTDKPIEERVHVQGPPGGDPSIFAGQSASSIFTPQLWKACGYVPKKFSFKYNEFPFLNNDNDNEGGPAKDDSNDNGAGAGALVSLSKEGNNIASAAPVLNTSSPVGASVETRSGQGKGADTGKFGSEDVPPRVPSDVKKERTLLRPPVVHNSQRSKGDFVGNSSSKERSGKKRLRTSDREVDPRKKTLHSSKTVVTPTADGKQLEFCEDRGSKIFKADTRSIKNKNLKDMVVQEHVSDDHVAVDTTMEEPNNNLTTTEDSSEPLYPDMTKHGVSVGDVVAEEKASHKTPTLVEMSSKTDDAVTSSLKQNYVGNASVKEKDGDCLVADNADDTLVVRSAASPRTEGHCGSAPELVDNQVSQDLDRNMRSSSTKCKVKMRRDDVDNFRKPSNFHSSPMSDLKNNDKPSDHTSDIVKVNDAPVPSLPSCESKVGGFDISSEPIPADHTNKPNELSGDFCQRKQDPVGSEGSFETQKGFTETKDSLDAAKDPSKSEAIGCLPKVGKSSPTSSTMNSKSLGHDIKSEDTEIPNSFTKHGVMADSNIHTKNENCPSDAARDENQKKSVKERPKSSLNSNSKGLQSSRSMQNSVPKQVNSDARDSVHVSSSKPLIHQTASILGSSESNASLHHQKVLQVQNKISSSAPQKVEKLNQTNIHTSSKLNQSHVSSVNPSPISNSSMLSDEELALLLHQELNSSPRVPRVPRARHAGSLPQLTSASATSMLMKRTSGGGKDHYLVSRRKHKDASRPGSGSSRELEDEAKKIEKEKGPSSSDQRKLDMSYVEDAPAREEGLASMAVTNSITNNTVSSTSGIANSDASSPPEDQNLSSMRNSPRNVSDDDTATAGRPVHRTLPGLINDIMSKGRRMTYEELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRHEWARLVDRGPKTNSNRKRRKLDAEESDDNGYGKGRTAKDVEGKNFELQKEEFPKGKRKARKRRRLALQGRAVKDVRRRQKVSSLTDEDLGPFSNSSEESMFSEDEIQAGRICPAGSSSDEAGSA* 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1572 1148 MobiDBLite consensus disorder prediction 1031 1078 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 180 201 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 924 966 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 828 842 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 216 317 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 924 956 - -
Gso10g1572 1148 SMART PHD_3 26 69 IPR001965 -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 487 507 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 771 795 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 687 724 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 668 686 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 216 230 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 1031 1148 - -
Gso10g1572 1148 PANTHER UNCHARACTERIZED 1 1145 - -
Gso10g1572 1148 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 77 IPR013083 -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 849 897 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 814 897 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 285 309 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 1110 1126 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 653 667 - -
Gso10g1572 1148 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 1 1145 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 621 635 - -
Gso10g1572 1148 ProSitePatterns Zinc finger PHD-type signature. 27 68 IPR019786 -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 461 724 - -
Gso10g1572 1148 MobiDBLite consensus disorder prediction 1092 1108 - -
Gso10g1572 1148 SUPERFAMILY FYVE/PHD zinc finger 15 73 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1572 Gso-Chr10 42181048 42190625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1572 25 68 PHD Transcription Factor Family AT5G22260 44.681 2.82e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1572 - - gmx:100810855 2226.82