Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1559 ATGGAAAACAATAGCCAGAACCATCACCATCAACACCATGGTTTCTCTGCCAAATCGAGTAGTACTAAGGAGAGAAGGGGTCTCGACTTTGATTTAAACGAACCCATAATTGATACAAGCTTTGAGACTTCTCCTCCTCTGGTTCCTGCTGATAACATTAATAATTGCCTGGTGGAAATGGAAGGGTGCCAACCTCTTGCTCCTCCCACACAAGACGTTGCTGAACAAGTACACTCCTCCAATGATGCGGAAAAGGTGAAGTTTCGATTTGATCTTAACGCTAAACCTGATGAGGAGGAGGAAGTTAGTGCCAAAGTTGGTGGAGGGAGTGAAACACATGCTGCTGTATCTGAATCAGCTGACAACGTTGGACCTGACAATGGTTTGGAGCTCACTCTTAATAATGATGTTCATCCAACACATGCTGCTGATGACAGTGATTATGAAGAAGACAGAGCCAGTATTGGGGAAGGAGGATCTGACACTGAGAACAGGAAGAGGAAGAGATCTTTGGAGGAATATAAGAAAGGGACTGGGAAGTCTTTCCATGGGGAAACAACAGTGGTGGTGCAATTTGAGAGCAAAAACGAGACCATATTGGATGATGGATATAACTGGCGAAAATATGGCCAGAAGGTTATCAAGGGACATACATACCCTAGAAGGAAACGTCACCAGATACAGCTTGTGGATGATGAAGAAGATGAAGACGAAGATGAAGATGATGGCCTAATGACTTTTCAATTTGCTGCGACTGGGAATTTTCTGAATAACCCAAACCCTGCAGAAACTGATCAAGTTCACACACTTCAACTTCGTAATGACATGAATCCTGATCAATTTGCCAATGGGTTTCTGAGTCCCAATAACCATTTTGGAAGTTTCAACAATAATATAAACATGAATATTGGGTCTTCTTCCTACACCCCCCAAATGCATTATTATTCTTCCTTGAATAATACTAAAGCCATGCCTCAAAGCTCCTATGGACTCAACTTTGGCAGTGATGCTGCCCCTCAACCTGGGCCTTCCGGGGTACCAGGTGCAGGAGATAATTAG 1059 0.4334 MENNSQNHHHQHHGFSAKSSSTKERRGLDFDLNEPIIDTSFETSPPLVPADNINNCLVEMEGCQPLAPPTQDVAEQVHSSNDAEKVKFRFDLNAKPDEEEEVSAKVGGGSETHAAVSESADNVGPDNGLELTLNNDVHPTHAADDSDYEEDRASIGEGGSDTENRKRKRSLEEYKKGTGKSFHGETTVVVQFESKNETILDDGYNWRKYGQKVIKGHTYPRRKRHQIQLVDDEEDEDEDEDDGLMTFQFAATGNFLNNPNPAETDQVHTLQLRNDMNPDQFANGFLSPNNHFGSFNNNINMNIGSSSYTPQMHYYSSLNNTKAMPQSSYGLNFGSDAAPQPGPSGVPGAGDN* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1559 352 MobiDBLite consensus disorder prediction 140 168 - -
Gso10g1559 352 SMART WRKY_cls 200 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g1559 352 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 67 221 - -
Gso10g1559 352 SUPERFAMILY WRKY DNA-binding domain 197 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso10g1559 352 MobiDBLite consensus disorder prediction 1 26 - -
Gso10g1559 352 MobiDBLite consensus disorder prediction 90 106 - -
Gso10g1559 352 Gene3D WRKY domain 186 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso10g1559 352 ProSiteProfiles WRKY domain profile. 195 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g1559 352 MobiDBLite consensus disorder prediction 90 168 - -
Gso10g1559 352 MobiDBLite consensus disorder prediction 330 352 - -
Gso10g1559 352 Pfam WRKY DNA -binding domain 201 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g1559 352 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 67 221 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1559 Gso-Chr10 42044417 42047566 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1559 142 221 WRKY Transcription Factor Family AT4G26440 43.956 2.32e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso10g1559 WRKY 1.1e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1559 - K18835 gsj:114371774 690.649