Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1558 ATGGATTTCTCAAATGCTTCTCCTTCTCCAACACAAGTTGATCAACAAAATGATGAGAAAACAGTGAAGGTTTCATTGTCATTTGATCTTAATTCCAAACCAGAGGAGGAGGAGGAGGAACCAATTTCTTTCTCGGAGGAAGCCCGTGCCAAAGTTGGTGGCGGCTGTGAAACCAGAGCCGCTAGTGCTTCTGAACCAGACGATCACATTCAACAAGTTGCTCTTCCTACCGATGCTGCTCACAATCACAGAGTCAACATTGTTGATCCGGAATCTGACTCTCAGAATAGGAAGAGAAAAAGATCTGATAATAGAGGGATGGGAAGCGTTGTCCGTAGGGAAACCTTTGTGTTGCCATTTGAGACCCAAAGTGAGACAGTAATATTTGTGGATGATGGCTATCAGTGGCACCAATATGGACTCAAGACTATGAAGGGAAATTTATTCCCTAGGGTCTACTACAAATGCGCAAGTGCAGGGTGTTGCGCAAGGAAGGAAGTGGACAGAAATTCAGTCAACACAAAACATGTGATTACTACTTATGTTGGTAAACACAATCATGAACCACCCACAAATTAA 579 0.4318 MDFSNASPSPTQVDQQNDEKTVKVSLSFDLNSKPEEEEEEPISFSEEARAKVGGGCETRAASASEPDDHIQQVALPTDAAHNHRVNIVDPESDSQNRKRKRSDNRGMGSVVRRETFVLPFETQSETVIFVDDGYQWHQYGLKTMKGNLFPRVYYKCASAGCCARKEVDRNSVNTKHVITTYVGKHNHEPPTN* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1558 192 Gene3D WRKY domain 116 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso10g1558 192 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 191 IPR044810 GO:0003700
Gso10g1558 192 SMART WRKY_cls 130 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g1558 192 SUPERFAMILY WRKY DNA-binding domain 126 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso10g1558 192 MobiDBLite consensus disorder prediction 1 107 - -
Gso10g1558 192 ProSiteProfiles WRKY domain profile. 125 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g1558 192 MobiDBLite consensus disorder prediction 84 107 - -
Gso10g1558 192 MobiDBLite consensus disorder prediction 1 28 - -
Gso10g1558 192 Pfam WRKY DNA -binding domain 131 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g1558 192 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 12 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1558 Gso-Chr10 42040229 42041983 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1558 130 192 WRKY Transcription Factor Family AT1G13960 50.794 7.71e-17 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso10g1558 WRKY 2.7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1558 - K18835 gmx:102666270 378.252