Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1557 ATGGAAGGGTGCCAACCTCTTGCTGAACAAATGCAGTCCTCCAATGATGTCGCCAAAACGGTGAAGCTTCCATTGCCATTTGATCTTAATACTATACCTAATGAGGATGAGGAAGCAAGACCGGCAACTTCTGATGAGACTTGGCTCCCCGATTCTGAATCCGATGACAACTTCCGACCCTTACAACAACCATCATCTACTCCAGATGCTCCTGTTGACATTGATGATGTTGAAGACCGAGCTAGTATTGTGGAGGGAGGATCTGACTCTGGGAACAGGAAGAGGAAGAGATCCTTGGAGGAATCTGATAAAGGGACTGCAGGGAGGTCTTTCCATGGAGAAACAGAATTGACAGTGCGAATTGGTAGCAAAAAAGAGATAGATGATGATGGATATCGCTGGCGCAAATATGGCCAGAAGATTATGAAGGGATGTCTATACCCTAGGGCATACTACAAATGCGCAAGTGCTGGGTGTTTCGTAAGGAAACACGTGGAACGGGATTCGCGCAACAATAAAAATGTAATTATCACTTATGATGGAAGGCACAATCATGAACAGCCACCCTCATGGATAACTAACAAGAATAAACTTGTACTGGATGATGAAGGTGATGAAGAAGATGAAGATGATGGTGGTGAAGAACTTGCACCAACCAATAATGCTCTAATAACTAGGAATTTTCTGATGAATACCCCAAACCCTGCAGAACCTCAAGTTCACACACTTCAACTTCGTAATGACATGAATCCTGAATTTGCCAACAGGTTTATGAGGCCCAACCATTTTGGAAGTTTGAACAATAACATGAACATTGGGTCTTCCTCCAACAACCCCCACATGCATTATTCTTTCTTGAATAATACTAATTCCATGCCTCATCGCTCCTATGGATTCAACCTTGACAACCCTTATGCTACCCCTCAACCTAGGGGTCCTTCAATGTTTCCCCAGTTGCCGACTTCACCACCATTTAACAATATCAATGTTCCTTCTTCTAGAGGGTTTTCTTCTCAGGCTTGGCGTAATAATGATAAAAATGGGTCTAGTTCGGTGTTTCCTTCCAGGGAAACAGGTGCAAGGGACAAGCACTAG 1095 0.4365 MEGCQPLAEQMQSSNDVAKTVKLPLPFDLNTIPNEDEEARPATSDETWLPDSESDDNFRPLQQPSSTPDAPVDIDDVEDRASIVEGGSDSGNRKRKRSLEESDKGTAGRSFHGETELTVRIGSKKEIDDDGYRWRKYGQKIMKGCLYPRAYYKCASAGCFVRKHVERDSRNNKNVIITYDGRHNHEQPPSWITNKNKLVLDDEGDEEDEDDGGEELAPTNNALITRNFLMNTPNPAEPQVHTLQLRNDMNPEFANRFMRPNHFGSLNNNMNIGSSSNNPHMHYSFLNNTNSMPHRSYGFNLDNPYATPQPRGPSMFPQLPTSPPFNNINVPSSRGFSSQAWRNNDKNGSSSVFPSRETGARDKH* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1557 364 SUPERFAMILY WRKY DNA-binding domain 124 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso10g1557 364 SMART WRKY_cls 128 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g1557 364 Pfam WRKY DNA -binding domain 129 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g1557 364 MobiDBLite consensus disorder prediction 73 110 - -
Gso10g1557 364 MobiDBLite consensus disorder prediction 321 356 - -
Gso10g1557 364 MobiDBLite consensus disorder prediction 304 364 - -
Gso10g1557 364 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 6 304 IPR044810 GO:0003700
Gso10g1557 364 Gene3D WRKY domain 113 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso10g1557 364 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 6 304 - -
Gso10g1557 364 MobiDBLite consensus disorder prediction 25 111 - -
Gso10g1557 364 ProSiteProfiles WRKY domain profile. 123 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1557 Gso-Chr10 42034717 42037176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1557 114 210 WRKY Transcription Factor Family AT2G04880 47.423 5.52e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso10g1557 WRKY 1.7e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1557 K18835 - gsj:114371773 743.036