Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1544 ATGAACTGCTTCCCTTGTTGTGGCCCTAAAAAAAGCAATAGCAAGAGGGAGCATGGGTCTCCACCCCCAGAACTTGTTACAGGAAAAAATCCAGATATGAAGAAACAAAAAGCTGACGAGCAAAACCAAGCTGACCCTGGCAATATTCAGGCACAGGCTTTCAGTTTCCGTGAGCTAGCAACAGCAACAAAGAATTTCCGTCAGGAATGCCTCATTGATGAAGGAGGTTTCGGCAGAATCTACAAAGGGATAATTCCTTCCACCGGCCAGCTTGTGGCGGTGAAGCAACTCGACCGAAATGGGATCCAAAGCAGTAAGGAATTTCTGGCTGAGGTTGCGGAGCTAAGTCTCTTGCACCACGAAAATCTGGTCAATCTCATTGGTTATTGTGCTGATGGAGATCAACGTCTTTTGGTCTACGAGTTATTTGCTTCGCGTACTCTAGAAAACCGTCTTTTTGAGAAAAAAGCGGATGAGAGCCCATTAAATTGGTTTGAAAGAATGAAAATAGTAGCGGCTGCTTCTAAAGGACTAGAGTACTTGCATGAGACTTCGAAGCCCCCGGTTATATACCGGGACTTGAAAGCGTCGAGCATCTTGGTGGACAGTGATCTGCTTGCAAAACTATGTGATGTTGGCATGGCCAAGCTTTCTGGTGGAGACAAGATGAACAATGGACCTCCAAGACTTATGGGTACCTATGGTCACTGTGCTCCCGAGTATGTAAAAGCTGGTCAACTCACCTTGAAATCAGATGTATACAGTTTCGGAGTTGTCTTGCTAGAGCTCATAACTGGACGAAGAGCCATTGACACCTCAAAGCCAAACGAAGAGCAGAATCTTGTTTCATGGGCAACACCCTTGTTCAGGGACCCCAAGAGATATCCAGAAATGGCAGATCCACTTCTTAATAAGAACTTCCCAGAAAAAGATCTGAATCAAGTTGTTGCAATAGCATCCATGTGCTTACAGGAGGAAGCAGAAGCTCGTCCTTTGATCAGTGACGTTGTAACTGCTCTAGGTTTCCTTTCCGCGCCTCCTCCTCCACCTGCTCATGCTCCTGTCCCCAAAAAGAGTGATGTTGCTGAAAGCGAAAGGGAAAGCGATAGCGAGGGCGAAAGTGAGAGCGGAAGCGACGCAATATCTAGAAAGGGAAGCCGCAGATCATCGTTGGATAAAAGTCAACATGATTATTGTGATAGCAGCCATCTTCCACCAGTGGTTTCCTCTAAACCAAGCCGCAAAAGCAGCACCAGATCAAGTAAAGGAAAACACAGTTCAGAATCAGGAGATGGGGTTAGCGTTTCTTCCATCAGCAGCAAGAGCAGTAGGAAATCTCGCGGTGATTTAAGCCAGAAGAGCAGCAGAAAATCTTCTGTGGAAGATTTAAGCCAGCAGAAGAGCAGCAAAAAATCCTCCGTGGAAGACCTAAGCCAGCATAAGAGCAGCAGAAAGTCTTCTAGCACCAAAGACTTAAGCCAGAAGAGCAGCAGAAAATCTTCCGTGGAAGACCTAAGCCAGCATAAGAGCAGCAGAAAGTCTTCTAGCACCAAAGACTTAAGCCAGAAGAGCAGCAGAAAATCTTCCATCAGAAAACCTTCTAGCAGAGTTTTGAGCCACAAGAGCAACGTTGCATCTGAGGATGGAAGCATTTCCTCAAGTTGTCGTAGCAGCAGTGTGGGATCAGAGGATGAAGGGGTTCGGTCAGAGCGTAGCAGCATGAGGCTATCACAAGGAAGTTATCGCTCGGACCCCTATGGCAGCAGAAGGACAGAGGATGAGAGCATGAATATTTTAGACCGTGCAACCAGCATTGGGTCTGATGAGGATAGTGGTCACCCTTTTGACCAAACAAGCAGCAGTGGAGGATCAAGTGTTTATTCGCGATAA 1890 0.4656 MNCFPCCGPKKSNSKREHGSPPPELVTGKNPDMKKQKADEQNQADPGNIQAQAFSFRELATATKNFRQECLIDEGGFGRIYKGIIPSTGQLVAVKQLDRNGIQSSKEFLAEVAELSLLHHENLVNLIGYCADGDQRLLVYELFASRTLENRLFEKKADESPLNWFERMKIVAAASKGLEYLHETSKPPVIYRDLKASSILVDSDLLAKLCDVGMAKLSGGDKMNNGPPRLMGTYGHCAPEYVKAGQLTLKSDVYSFGVVLLELITGRRAIDTSKPNEEQNLVSWATPLFRDPKRYPEMADPLLNKNFPEKDLNQVVAIASMCLQEEAEARPLISDVVTALGFLSAPPPPPAHAPVPKKSDVAESERESDSEGESESGSDAISRKGSRRSSLDKSQHDYCDSSHLPPVVSSKPSRKSSTRSSKGKHSSESGDGVSVSSISSKSSRKSRGDLSQKSSRKSSVEDLSQQKSSKKSSVEDLSQHKSSRKSSSTKDLSQKSSRKSSVEDLSQHKSSRKSSSTKDLSQKSSRKSSIRKPSSRVLSHKSNVASEDGSISSSCRSSSVGSEDEGVRSERSSMRLSQGSYRSDPYGSRRTEDESMNILDRATSIGSDEDSGHPFDQTSSSGGSSVYSR* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1544 629 MobiDBLite consensus disorder prediction 1 47 - -
Gso10g1544 629 MobiDBLite consensus disorder prediction 427 445 - -
Gso10g1544 629 Pfam Protein tyrosine and serine/threonine kinase 71 339 IPR001245 GO:0004672|GO:0006468
Gso10g1544 629 ProSiteProfiles Protein kinase domain profile. 66 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1544 629 MobiDBLite consensus disorder prediction 535 562 - -
Gso10g1544 629 MobiDBLite consensus disorder prediction 473 526 - -
Gso10g1544 629 Gene3D Phosphorylase Kinase; domain 1 34 142 - -
Gso10g1544 629 Gene3D Transferase(Phosphotransferase) domain 1 144 342 - -
Gso10g1544 629 MobiDBLite consensus disorder prediction 346 629 - -
Gso10g1544 629 MobiDBLite consensus disorder prediction 457 472 - -
Gso10g1544 629 MobiDBLite consensus disorder prediction 358 399 - -
Gso10g1544 629 PANTHER OS07G0668900 PROTEIN 1 572 - -
Gso10g1544 629 PANTHER RECEPTOR-LIKE KINASE LIP1 1 572 - -
Gso10g1544 629 SUPERFAMILY Protein kinase-like (PK-like) 48 344 IPR011009 -
Gso10g1544 629 MobiDBLite consensus disorder prediction 598 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1544 Gso-Chr10 41930110 41933940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1544 1 390 Glycoside Hydrolase AT3G07070 55.714 8.22e-151 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso10g1544 PK_Tyr_Ser-Thr 5.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1544 - - gmx:100805544 1051.97