Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1535 ATGGCTTCTCTCTCTTGCTCCGCCAACGACCTTGCCCCACTCATCAACGACACCGCCGCCGCCAACTACCTCTGCGCACAATTCGATTCCATTTCTAGAAAGCTCGCCGAAACAACCTACGCCGTCGACAACACCTACCTTCTGTTTTCAGCGTATCTTGTCTTCGCCATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCAGAGCCAAAAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGCGGTCTCTCCTACTACCTATTCGGCTTTGCATTCGCCTTCGGCGGCCGCTCCAACGGCTTCATCGGCCGCCAAAACTTCGGCCTACGAGATTACCCGATGGGCTCCTCTATCTCCAGCTTCTTCCTCCACCAGTTGGTCTTAGCCATCGCCGACGCAGGAATCACCATCTCTCCCTTCGGCAGCTTCTTCCTCTACCAGTGGGCCTTCGCCATCGCCGCCGCAGGAATCACCAGCGGCTCCATCGCCGAGAGAACACAGTTCGTGGCTTACCTTATCTACTCTTCTTTCTTAACCGGTTTCGTTTACCCCATCGTTTCGCATTGGTTCTGGTCCTCAGACGGTTGGGCCAGCGCGACTCGTATTGACGGAAATGTTTTATTCGGGTCTGGAGTCATCGACTTCGCGGGCTCAGGCGTTGTTCACATGGTTGGCGGGATAGCGGGCCTGTGGGGGGCTTTAATTGAAGGCCCGAGAATCGGCCGGTTCGACCGTTCGGGCCGGTCGGTTGCTTTACGTGGCCACAGCGCGTCTTTAGTTGTGCTTGGTACGTTTTTGTTATGGTTCGGCTGGTACGGCTTCAACCCTGGTTCGTTTCTGACAATAGCCAAGGGGTATGGAAGTGGAGGGTATTATGGTCAATGGAGCGCTATAGGGAGGACAGCTGTCACGACGACATTGGCTGGGAGCACTGCGGCTCTGACGACGTTGTTCAGCAAGCGGTTATTGGCTGGCCACTGGAACGTGATTGACGTGTGTAACGGCCTGCTTGGCGGGTTCGCTGCCATTACATCGGGCTGTGCCGTTGTGGAACCGTGGGCCGCGATTGTGTGTGGGTTTGTGGCGGCGTGGGTTTTGATTGGGCTTAATAAGCTTGCCGCGAAGGTAGAGTACGATGATCCGTTGGAGGCGGCGCAGCTTCACGGCGGGTGCGGAGCGTGGGGGGTTTTCTTCACGGGATTGTTTGCGAAGAAAGAGTACGTGGAGGAGATTTACCGTGGTGGAAGGCCGTTCGGGGCTTTGATGGGTGGCGGAGGGAGGCTGCTGGCGGCGCAGGTGATTCAGATATTGGTGGTGTGCGGGTGGGTTACGGCGACCATGGCGCCGTTGTTCTATGGGCTTCATAAGATGAAACTGTTGAGAATTTCGAGGGATGATGAGACTGCGGGGATGGATTTGACGAGGCATGGTGGGTTTGCTTATGCATACCATGATGATGAAGATGGTTCAAGCAGGGGAGTAGGGTTCATGCTGCGTAGAATTGAGCCTGCAGCTATTACCACTCCCTCTCCCCCCGCTGCACCACAAGTTTAA 1575 0.5638 MASLSCSANDLAPLINDTAAANYLCAQFDSISRKLAETTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGGRSNGFIGRQNFGLRDYPMGSSISSFFLHQLVLAIADAGITISPFGSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSSDGWASATRIDGNVLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRSVALRGHSASLVVLGTFLLWFGWYGFNPGSFLTIAKGYGSGGYYGQWSAIGRTAVTTTLAGSTAALTTLFSKRLLAGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVAAWVLIGLNKLAAKVEYDDPLEAAQLHGGCGAWGVFFTGLFAKKEYVEEIYRGGRPFGALMGGGGRLLAAQVIQILVVCGWVTATMAPLFYGLHKMKLLRISRDDETAGMDLTRHGGFAYAYHDDEDGSSRGVGFMLRRIEPAAITTPSPPAAPQV* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1535 524 PANTHER AMMONIUM TRANSPORTER 149 518 - -
Gso10g1535 524 PANTHER AMMONIUM TRANSPORTER 1 144 - -
Gso10g1535 524 SUPERFAMILY Ammonium transporter 40 469 - -
Gso10g1535 524 TIGRFAM amt: ammonium transporter 43 488 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gso10g1535 524 PANTHER AMMONIUM TRANSPORTER 1 144 - -
Gso10g1535 524 PANTHER AMMONIUM TRANSPORTER 149 518 - -
Gso10g1535 524 Gene3D Ammonium transporter AmtB like domains 21 503 IPR029020 -
Gso10g1535 524 Pfam Ammonium Transporter Family 46 488 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gso10g1535 524 ProSitePatterns Ammonium transporters signature. 221 246 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1535 Gso-Chr10 41824687 41826635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1535 22 518 Inorganic Solute Cotransporters AT1G64780 78.044 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1535 K03320 K07573 gmx:100801277 937.947