Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1534 ATGGCTTCTCTCTCTTGCTCCGCCAACGACCTTGCCCCACTCTTCAACGACACCGCCGCCGCCAACTACCTCTGCGCCAAATTCGATTCCATTTCTAGAAAGCTCGCCGAAACAACCTACGCCGTCGACAACACCTACCTTCTGTTTTCAGCGTATCTTGTCTTCGCCATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCAGAGCCAAAAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGCGGTCTCTCCTACTACCTATTCGGTTTTGCATTCGCCTTCGGCGGCCCCTCCAACGGCTTCATCGGCCGCCACTTCTTCGGCCTACGAGATTACCCGATGGGAGATTACCCGATGGACTCCTCTCCCAACGGCGACTACAGCTTCTTCCTCTACCAGTGGGCCTTCGCCATCGCCGCCGCAGGAATCACCAGCGGCTCCATCGCCGAGAGAACACAGTTCGTGGCTTACCTTATCTACTCTTCTTTCTTAACCGGTTTCGTTTACCCCATCGTTTCGCATTGGTTCTGGTCCCCAGACGGTTGGGCCAGCGCGAGTCGTATTGACGGAAATGTTTTATTCGGGTCTGGAGTCATCGACTTCGCGGGCTCAGGCGTTGTTCACATGGTTGGCGGGATAGCGGGCCTGTGGGGGGCTTTAATTGAAGGCCCGAGAATCGGCCGGTTCGACCGTTCGGGCCGGTCGGTTGCTTTACGTGGCCACAGCGCGTCTTTAGTTGTGCTTGGTACGTTTTTGTTATGGTTCGGCTGGTACGGCTTCAACCCTGGTTCGTTTCTGACAATAGCCAAGGGGTATGGAAGTGGAGGGTATTATGGTCAATGGAGCGCTATAGGGAGGACAGCTGTCACGACGACATTGGCTGGGAGCACTGCGGCTCTGACGACGTTGTTCAGCAAGCGGTTATTGGCTGGCCACTGGAACGTGATTGACGTGTGTAACGGCCTGCTTGGCGGGTTCGCTGCCATTACATCGGGCTGTGCCGTTGTGGAACCGTGGGCCGCGATTGTGTGTGGGTTTGTGGCGGCGTGGGTTTTGATTGGGCTTAATAAGCTTGCCGCGAAGGTAGAGTACGATGATCCGTTGGAGGCGGCGCAGCTTCACGGCGGGTGCGGAGCGTGGGGGGTTTTCTTCACGGGATTGTTTGCGAAGAAAGAGTACGTGGAGGAGATTTACCGTGGTGGAAGGCCGTTCGGGGCTTTGATGGGTGGCGGAGGGAGGCTGCTGGCGGCGCAGGTGATTCAGATATTGGTGGTGTGCGGGTGGGTTACGGCGACCATGGCGCCGTTGTTCTATGGGCTTCATAAGATGAAACTGTTGAGAATTTCGAGGGATGATGAGACTGCGGGGATGGATTTGACGAGGCATGGTGGGTTTGCTTATGCATACCATGATGATGAAGATGGTTCAAGCAGGGGAGTAGGGTTCATGCTGCGTAGAATTGAGCCTGCTGGTACCTCTCCCTCTCCCCCCGCTGCACCACAAGTTTAA 1530 0.5654 MASLSCSANDLAPLFNDTAAANYLCAKFDSISRKLAETTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGGPSNGFIGRHFFGLRDYPMGDYPMDSSPNGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSPDGWASASRIDGNVLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRSVALRGHSASLVVLGTFLLWFGWYGFNPGSFLTIAKGYGSGGYYGQWSAIGRTAVTTTLAGSTAALTTLFSKRLLAGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVAAWVLIGLNKLAAKVEYDDPLEAAQLHGGCGAWGVFFTGLFAKKEYVEEIYRGGRPFGALMGGGGRLLAAQVIQILVVCGWVTATMAPLFYGLHKMKLLRISRDDETAGMDLTRHGGFAYAYHDDEDGSSRGVGFMLRRIEPAGTSPSPPAAPQV* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1534 509 Gene3D Ammonium transporter AmtB like domains 21 489 IPR029020 -
Gso10g1534 509 PANTHER AMMONIUM TRANSPORTER 1 505 - -
Gso10g1534 509 TIGRFAM amt: ammonium transporter 43 474 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gso10g1534 509 ProSitePatterns Ammonium transporters signature. 207 232 IPR018047 GO:0008519|GO:0016020|GO:0072488
Gso10g1534 509 PANTHER AMMONIUM TRANSPORTER 1 505 - -
Gso10g1534 509 Pfam Ammonium Transporter Family 46 474 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gso10g1534 509 SUPERFAMILY Ammonium transporter 40 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1534 Gso-Chr10 41811186 41813137 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1534 22 503 Inorganic Solute Cotransporters AT1G64780 80.825 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1534 K03320 K07573 gmx:100797209 923.694