Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1532 ATGGCTTCTCTCTCTTGCTCCGCCAACGACCTTGCCCCACTCTTCAACGACACCGCCGCCGCCAACTACCTCTGCGCCCAATTCGATTCCATTTCTAGAAAGCTCGCCGAAACAACCTACGCCGTCGACAACACCTACCTTCTGTTTTCAGCGTATCTTGTCTTCGCCATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCAGAGCCAAAAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGCGGTCTCTCCTACTACCTATTCGGCTTTGCATTCGCCTTCGGCGGCCCCTCCAACGGCTTCATCGGCCGCCACTTCTTCGGCCTACGAGATTACCCGATGGGCTCCTCTCCCTCCGGCGACTACAGCTTCTTCCTCTACCAGTGGGCCTTCGCCATCGCCGCCGCAGGAATCACCAGCGGCTCCATCGCCGAGAGAACACAGTTCGTGGCTTACCTTATCTACTCTTCTTTCTTAACCGGTTTCGTTTACCCCATCGTTTCGCATTGGTTCTGGTCCTCGGACGGTTGGGCCAGCGCGAGTCGTAGCGACGGAAATATTTTATTCGGGTCTGGAGTCATCGACTTCGCGGGCTCAGGCGTTGTTCACATGGTTGGCGGGATAGCGGGCCTGTGGGGGGCTTTAATTGAAGGCCCGAGAATCGGCCGGTTCGACCGTTCGGGCCGGTCGGTTGCTTTACGTGGCCACAGCGCGTCTTTAGTTGTGCTTGGTACGTTTTTGTTATGGTTCGGCTGGTACGGCTTCAACCCTGGTTCGTTTCTGACAATAGCCAAGGGGTATGGAAGTGGAGGGTATTATGGTCAATGGAGCGCTATAGGGAGGACAGCTGTCACGACGACATTGGCTGGGAGCACTGCGGCTCTGACGACGTTGTTCAGCAAGCGGTTATTGGCTGGCCACTGGAACGTGATTGACGTGTGTAACGGCCTGCTTGGCGGGTTCGCTGCCATTACATCGGGCTGTGCCGTTGTGGAACCGTGGGCCGCGATTGTGTGTGGGTTTGTGGCGGCGTGGGTTTTGATTGGGCTTAATAAGCTTGCCGCGAAGGTAGAGTACGATGATCCGTTGGAGGCGGCGCAGCTTCACGGCGGGTGCGGCGCGTGGGGTGTTTTCTTCACGGGATTGTTTGCGAAGAAAGAGTACGTGGAGGAGATTTACGGTGTTGGAAGGCCGTTCGGGGCTTTGATAGGTGGCGGAGGGAGGCTGCTGGCGGCGCAGGTGATTCAGATATTGGTGGTGTGCGGGTGGGTTACGGCGACCATGGCGCCGTTGTTCTATGGGCTTCATAAGATGAAACTGTTGAGAATTTCGAGGGATGATGAGACTGCGGGGATGGATTTGACGAGGCATGGTGGGTTTGCTTATGCATACCATGATGATGAAGATGGTTCAAGCAGGGGAGTAGGATTCATGATGCGTAGAATTGAGCCTGCTGCTAGTACCACTCCCTCTCCCCCCGCTGCACCACAAGTTTAA 1518 0.5659 MASLSCSANDLAPLFNDTAAANYLCAQFDSISRKLAETTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGGPSNGFIGRHFFGLRDYPMGSSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSSDGWASASRSDGNILFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRSVALRGHSASLVVLGTFLLWFGWYGFNPGSFLTIAKGYGSGGYYGQWSAIGRTAVTTTLAGSTAALTTLFSKRLLAGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVAAWVLIGLNKLAAKVEYDDPLEAAQLHGGCGAWGVFFTGLFAKKEYVEEIYGVGRPFGALIGGGGRLLAAQVIQILVVCGWVTATMAPLFYGLHKMKLLRISRDDETAGMDLTRHGGFAYAYHDDEDGSSRGVGFMMRRIEPAASTTPSPPAAPQV* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1532 505 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
Gso10g1532 505 Gene3D Ammonium transporter AmtB like domains 21 485 IPR029020 -
Gso10g1532 505 PANTHER AMMONIUM TRANSPORTER 1 500 - -
Gso10g1532 505 PANTHER AMMONIUM TRANSPORTER 1 500 - -
Gso10g1532 505 SUPERFAMILY Ammonium transporter 40 450 - -
Gso10g1532 505 Pfam Ammonium Transporter Family 46 469 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gso10g1532 505 TIGRFAM amt: ammonium transporter 43 469 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1532 Gso-Chr10 41793998 41796146 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1532 22 499 Inorganic Solute Cotransporters AT1G64780 81.950 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1532 K03320 K07573 gmx:100797209 924.465