Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1503 ATGAAAAATGCAACAAGATTAAGAGGAACCAAAGCAAAGAGAACAACCACCAAAATGCAAAGCCACCTGCTGTTCTTCTTCTATTGTTACATTGGCCTTTCACTTATTTTTACTAAAGCTGCAGCAGATGATGAATTGTCAACTCTTCTCTCAATCAAATCCACTCTCATTGACCCAATGAAGCATCTGAAGGATTGGCAACTACCAAGCAATGTGACACAGCCAGGTTCACCTCATTGTAACTGGACTGGAGTTGGTTGCAACTCTAAAGGCTTTGTAGAGAGTCTTGAACTCTCCAACATGAACCTCAGCGGTCATGTTTCAGACCGCATCCAATCTCTTTCAAGTCTGTCTTCATTCAACATAAGCTGTAACAGATTTTCTTCATCACTGCCCAAATCACTGTCCAACCTCACCTCTCTCAAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGCAGCTTCCCCACTGGTCTTGGAAGAGCTGCAGGCTTGAGATCAATCAATGCATCGAGCAATGAATTTTTGGGTTTTCTTCCTGAGGATATTGGAAATGCAACATTGCTCGAGAGCCTTGATTTTCGAGGGAGCTACTTTGTGAGTCCAATCCCCAGGAGTTTCAAGAATTTGCAGAAGCTCAAGTTTCTAGGCCTTTCAGGCAATAACTTCACAGGGAAGATTCCAGGATATCTCGGGGAACTCGCTTTTCTAGAGACATTGATTATAGGATACAATTTGTTTGAAGGTGAGATCCCTGCAGAGTTTGGCAACCTCACCAGTCTTCAATACCTTGACTTGGCTGTAGGCAGTCTAAGTGGACAAATACCAGCTGAATTGGGTAAGCTGACAAAACTCACCACAATTTATATGTACCATAACAACTTCACAGGAAAAATTCCACCTCAACTTGGCAACATTACTTCTCTAGCATTTTTGGACCTCTCTGACAATCAGATCTCTGGAGAGATTCCAGAAGAACTTGCTAAATTGGAAAACCTGAAGCTCTTAAATCTGATGACCAACAAATTAACTGGTCCAGTACCAGAGAAGCTTGGTGAATGGAAAAATTTACAGGTGCTTGAGCTATGGAAAAATTCTTTTCATGGTCCTTTGCCACACAACCTTGGACAGAACTCTCCTTTGCAGTGGTTGGATGTATCCTCCAACTCACTATCCGGGGAGATCCCTCCAGGTTTGTGTACTACAGGCAATCTCACTAAACTAATCCTTTTTAACAATTCCTTCACTGGTTTCATTCCAAGTGGACTTGCAAACTGTTCATCTTTGGTACGTGTTCGGATTCAGAACAATCTTATTTCTGGAACTATTCCAGTTGGCTTTGGAAGCCTCCTTGGCCTTCAACGGATGGAGTTGGCAAAGAACAACCTCACTGGGAAAATTCCTACTGATATTACCTCATCCACATCACTCTCTTTCATTGATGTATCTTGGAACCACCTTCAGTCCTCTCTACCCTCAGATATTCTTTCTATTCCATCCCTTCAAACCTTCATTGCCTCTCATAACAATTTTGGAGGAAATATCCCAGATGAGTTCCAGGACTGTCCATCTCTCTCTGTGCTGGATCTTTCAAACACCCATATATCCGGCACAATCCCTGAAAGCATTGCTTCTAGTAAAAAATTAGTCAACCTTAACCTTCGAAATAACCACTTGACAGGAGAAATCCCAAAATCGATCACAAACATGCCCACCTTATCTGTTCTTGACCTGTCCAATAATTCACTGACTGGTAGGATACCCGAAAATTTTGGCAACTCCCCAGCTTTGGAAATGCTTAACCTGTCCTATAACAAACTTGAGGGTCCAGTACCCTCAAATGGGATGTTGGTGACTATAAATCCTAATGATCTTATCGGCAATGAGGGTCTTTGTGGAGGCATTCTCCATCCATGTTCTCCAAGTTTTGCTGTGACAAGCCATCGAAGGAGCTCACATATCAGACACATCATTATTGGTTTTGTGACTGGCATTTCAGTGATTTTAGCTCTTGGTGCAGTATATTTTGGTGGCAGATGTTTATACAAGAGATGGCACTTGTATAACAATTTCTTCCATGATAGGTTCCAGCAAAGCAATGAGGATTGGCCCTGGAGGTTAGTAGCATTCCAGAGGATCACCATCACTAGTAGTGACATCCTTGCATGTATAAAGGAATCAAATGTCATAGGCATGGGGGGCACTGGTATTGTCTACAAAGCTGAAATCCATAGACCTCACATTACTGTAGCAGTAAAGAAACTATGGAGGTCACGGACAGACATAGAAGATGGCAATGATGTGTTGAGAGAAGTGGAACTCCTAGGGAGACTTAGGCACAGGAATATTGTTAGGCTGTTGGGGTATGTACACAATGAAAGGAATGTGATGATGGTTTACGAGTACATGCCTAACGGGAATCTCGGAACAGCACTGCATGGTGAACAATCTGCAAGGTTGCTTGTTGACTGGGTCTCAAGATACAACATAGCTCTTGGTGTTGCACAAGGGCTTAACTATCTCCACCATGATTGCCACCCACCAGTTATTCACAGGGATATCAAGTCTAACAACATACTCCTTGATGCAAATTTAGAGGCAAGAATAGCAGATTTCGGGTTGGCAAGGATGATGATTCAAAAGAATGAGACAGTTTCCATGGTGGCTGGATCATATGGATACATTGCACCAGAATATGGATACACTCTGAAGGTTGACGAGAAGATTGACATATACAGCTACGGAGTGGTGCTTTTGGAGCTCCTAACTGGCAAAACGCCTTTAGACCCTTCGTTTGAAGAATCAATTGACATAGTCGAATGGATAAGGAAGAAGAAAAGCAGCAAAGCCTTGGTAGAAGCACTGGATCCTGCTATAGCTAGTCAGTGCAAACATGTCCAAGAAGAGATGCTGCTTGTACTCCGGATTGCTCTTCTGTGTACTGCAAAGCTTCCCAAGGAAAGACCACCCATGAGAGACATCATCACAATGCTTGGAGAGGCAAAGCCAAGAAGGAAAAGTGTTTGCCATAATGGGGGACAAGACACCAGTAGCGTGGAAAAGCCAACGATCTTTACCACCTCCCCAGTAATCAGTCTTTTGTGA 3105 0.4296 MKNATRLRGTKAKRTTTKMQSHLLFFFYCYIGLSLIFTKAAADDELSTLLSIKSTLIDPMKHLKDWQLPSNVTQPGSPHCNWTGVGCNSKGFVESLELSNMNLSGHVSDRIQSLSSLSSFNISCNRFSSSLPKSLSNLTSLKSFDVSQNYFTGSFPTGLGRAAGLRSINASSNEFLGFLPEDIGNATLLESLDFRGSYFVSPIPRSFKNLQKLKFLGLSGNNFTGKIPGYLGELAFLETLIIGYNLFEGEIPAEFGNLTSLQYLDLAVGSLSGQIPAELGKLTKLTTIYMYHNNFTGKIPPQLGNITSLAFLDLSDNQISGEIPEELAKLENLKLLNLMTNKLTGPVPEKLGEWKNLQVLELWKNSFHGPLPHNLGQNSPLQWLDVSSNSLSGEIPPGLCTTGNLTKLILFNNSFTGFIPSGLANCSSLVRVRIQNNLISGTIPVGFGSLLGLQRMELAKNNLTGKIPTDITSSTSLSFIDVSWNHLQSSLPSDILSIPSLQTFIASHNNFGGNIPDEFQDCPSLSVLDLSNTHISGTIPESIASSKKLVNLNLRNNHLTGEIPKSITNMPTLSVLDLSNNSLTGRIPENFGNSPALEMLNLSYNKLEGPVPSNGMLVTINPNDLIGNEGLCGGILHPCSPSFAVTSHRRSSHIRHIIIGFVTGISVILALGAVYFGGRCLYKRWHLYNNFFHDRFQQSNEDWPWRLVAFQRITITSSDILACIKESNVIGMGGTGIVYKAEIHRPHITVAVKKLWRSRTDIEDGNDVLREVELLGRLRHRNIVRLLGYVHNERNVMMVYEYMPNGNLGTALHGEQSARLLVDWVSRYNIALGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMIQKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKTPLDPSFEESIDIVEWIRKKKSSKALVEALDPAIASQCKHVQEEMLLVLRIALLCTAKLPKERPPMRDIITMLGEAKPRRKSVCHNGGQDTSSVEKPTIFTTSPVISLL* 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1503 1034 Gene3D Ribonuclease Inhibitor 237 396 IPR032675 -
Gso10g1503 1034 Pfam Protein kinase domain 726 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1503 1034 Gene3D Ribonuclease Inhibitor 163 236 IPR032675 -
Gso10g1503 1034 Gene3D Ribonuclease Inhibitor 44 162 IPR032675 -
Gso10g1503 1034 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXL1 24 1015 - -
Gso10g1503 1034 PANTHER UNNAMED PRODUCT 24 1015 - -
Gso10g1503 1034 Pfam Leucine rich repeat 548 607 IPR001611 GO:0005515
Gso10g1503 1034 PRINTS Leucine-rich repeat signature 309 322 - -
Gso10g1503 1034 PRINTS Leucine-rich repeat signature 570 583 - -
Gso10g1503 1034 Pfam Leucine rich repeat N-terminal domain 42 88 IPR013210 -
Gso10g1503 1034 ProSitePatterns Protein kinases ATP-binding region signature. 730 754 IPR017441 GO:0005524
Gso10g1503 1034 Gene3D Phosphorylase Kinase; domain 1 724 806 - -
Gso10g1503 1034 SUPERFAMILY L domain-like 381 633 - -
Gso10g1503 1034 Gene3D Transferase(Phosphotransferase) domain 1 807 1021 - -
Gso10g1503 1034 ProSiteProfiles Protein kinase domain profile. 724 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1503 1034 SUPERFAMILY Protein kinase-like (PK-like) 720 998 IPR011009 -
Gso10g1503 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 849 861 IPR008271 GO:0004672|GO:0006468
Gso10g1503 1034 SUPERFAMILY RNI-like 95 416 - -
Gso10g1503 1034 SMART serkin_6 724 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1503 1034 Gene3D Ribonuclease Inhibitor 397 640 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1503 Gso-Chr10 41475111 41478747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1503 24 1034 Receptor kinase-like Gene Family AT1G08590 64.050 0.0 1297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso10g1503 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1503 - - gmx:100793873 2000.71