Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1501 ATGGGTACTCCAGTGAATATTGTTGTGGGTTCTCATGTCTGGATTGAAGACCCAGAGGTATCTTGGATTGATGGACAGGTATTAAAAATAAATGGAAAGGATGCTGAAATTGAAGCTACCAATGGAAAAAAGGTTGTTGCAAATTTATCAAAAATATATCCTAAGGATATGGAAGCTCCTCCTGGTGGAGTGGATGATATGACAAAACTTTCCTATTTGCACGAGCCTGGAGTCCTGCAGAACTTAAAAGCTAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAGACTACCTCATATTTATGGTGCGCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAATTAAGTCCTCATGTGTTTGCAGTTGCTGATGTTGCATATAGGGCGATGATTAACGAAAAGAAAAGCAATTCAATTCTAGTCAGTGGGGAAAGTGGAGCTGGGAAAACTGAAACTACAAAAATGCTTATGCAATACCTTGCCTTCTTAGGTGGTAGGGCTGGTACTGAAGGGCGAACAGTTGAGCAACAAGTTCTTGAATCAAATCCAGTACTGGAAGCATTTGGGAATGCTAAAACTGTCAGGAATAACAATTCTAGCCGTTTTGGTAAATTTGTTGAGATCCAATTCGATAAAAGTGGAAGAATATCAGGAGCAGCCATCCGAACATATCTTCTAGAGAGATCTCGGGTTTGCCAAATTAATGATCCTGAAAGGAACTACCATTGCTTTTATCTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAAATACAAATTAGGAAATCCTAGATCATTTCACTACCTTAACCAGTCAAAATGCTATGAACTGGCTGATGTAAGTGATGCTCGTGAATATCTTGCCACCCGGAGAGCTATGGATATTGTTGGGATAAGCCAAAAAGATCAGGAAGCCATTTTCAGAGTTGTTGCTTCAATTCTTCATATTGGTAATATTGAATTTACCAAGGGAAAAGACATTGATTCATCAGTTCCAAAAGATGACAAATCCAAATTCCACCTGAAAACAACTGCTGAGCTTCTCATGTGTGATGCTGATGCCTTGGAAGACGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTTATAAAACGGAGCCTTGACCCCCAAAGTGCAGCAATCAGTAGAGATGGATTAGCAAAAACAATCTATTCTCGGCTATTTGACTGGTTGGTGGACAAGATTAATAATTCCATTGGACAAGACCCCAATTCTAAATCTTTGATTGGGGTCCTTGATATCTATGGTTTCGAAAGCTTTAAATCTAACAGTTTTGAGCAATTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGCACGTGTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAGATCAACTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAGAAGAAACCTGGAGGAATCATTGCTCTCCTCGATGAAGCTTGCATGTTTCCGAAGTCAACTCATGAAACATTTGCAAATAAGCTTTATCAAACATTTAAGAATCACAAGCGCTTTATTAAGCCAAAACTGTCTCGAACAGATTTCACAATTGCTCATTATGCTGGGGAGGTATTATACCAGTCTGACCAATTCTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTATTGAGTGCTTCCAAATGTTATTTTGTATCTGGCCTTTTTCCTCCACTTCCAGAAGAGACATCAAAATCTTCCAAATTTTCTTCAATTGGTTCTCGTTTTAAGCTACAACTACAAAGCCTGATGGAGACATTAAATTCTACAGAACCCCATTACATTAGATGTGTGAAACCAAACAACCAACTTAAGCCTGCAATTTTTGAGAATGTCAATATTATGCAACAACTTCGCTGTGGTGGTGTTTTGGAGGCAATCAGAATCAGTTGTGCTGGCTACCCTACTCGCCGTGCTTTCTTTGAATTTATAAACAGATTTGGCATCCTTGCTACAGAGGCCATGGAAGCAAACTGTGATGAAAAGGCTGGTTGCCAAAAGATTCTGGAAAAGATGGGGCTTCATGGATATCAGATTGGAAAAACAAAGGTATTCTTGAGAGCAGGTCAGATGGCTGAACTAGATGCACGGAGAGCTCAAGTACTTGGTAATGCAGCAAAAGTTATCCAACGGTGCGTACGAACTCATCAAGCTCGTAAACATTATCTTGCATTGCGAAAGAAGAGCATATATGTGCAGTCTCGGTGGAGAGGAAGACTTGCATGTAAACTCTATGAGCACTTGAGAAGGGAGGCTGCTGCTAGGAAAATTCAAAAGAATGTACGCAGATATGAATCTAGGAAAGCCTATAAAGAACTTCATGTGTCAGCACTTACACTGCAAACAGCTATAAGGGCCGTTGCTGCCCGCAAGAAATTCAGATTTAAGAAGCAAACTAAAGCTTCCATTATTATTCAGGCTCGGTGGCAGTGCCACAAAGCTGCCTTATATCATAAGAGGCTTAAGAAAGGTGCAATAGTTACACAATGCAGATGGAGGGGGCGCATAGCCAGGAAAGAACTTAGGAAACTGAAAATGGCTGCAAGAGAAACTGGTGCCCTTCAAGAAGCAAAGGATAAACTAGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAAGGTTTAAGGACCAATCTGGAAGAATCCAAAGCACAGGAGATAGCAAAAGTGCAGAATTTATTGCAGGAGATGCAGAACAAATTTGAAGAAACTAATGCTCTGCTCATCAAAGAGCGAGAGAATGCGAAGAAAGTTGTTGAAGAAGCACCTCCTGTCATTAAAGAAACACAGGTTATTGTTGAAGATACACAGAAGATCGAGAAACTGAACGCTGAAGTTGAGAGCCTAAAGACTTCACTCAAGTCAGAGAAACAGAAAGCTGATGACTTTGAAAGAAAATACAACGAAACCCAAGTTTGTAGCGAAGAAAGAGGTAAAAAACTAGAGGACACAGAGAAGAAGACACGTCAGCTTCAAGAATCATTGACTAGGCTAGAGGAGAAGATCACTAATTTAGAATCGGAGAATCAGGTTCTACGTCAACAAGCTGTGTCCATGGCACCTAATAAGTTCCTTTCAGGACGTTCAAGATCAATTATCCAGAGAACTGAAAGTGGTCATATTGTACAGGAAGCAAAGACAACTCTGCCTAATCAGGAAATGCACAGCAAATCAATGCACCGGAGGGAACCCTCTGACGGCTTGGACGATAAACCACAAAAGTCACTAAATGAAAAACAACAGGAGAATCAAGAGTTACTCATTAGATGTATTGCGCAACATCTAGGCTTTGCTGGGAACAGACCAATTGCTGCCTTTATCATATACAAATGCCTCTTGCACTGGAGATCATTTGAAGTTGAGCGTACTAGTGTTTTTGACCGTATCATCCAAACTATTGGCCATGCAATTGAGACCCAGGATAACAATGATGTCTTGGCTTATTGGTTATCCAATGCCTCTACACTTCTCTTGTTACTCCAGCGCACACTCAAGGCTAGTGGTGCTGCTGGAATGGCTCCACAACGCCATCGTTCTTCAGCAACCCTGTTTGGGAGGATGACTCAAAGTTTCCGTGGAGCACCAGCTGGAGTCAATGTTTCCCTAATCAATGGTAACACAAGCAGAGGAGTAGATACATTAAGACAAGTTGAGGCCAAGTACCCAGCTCTGCTGTTCAAACAACAGCTTACAGCATATGTGGAAAAGATATATGGAATGATTCGTGATAATTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTATGCATCCAGGCACCGAGAACATCCAGAGCAAGCCTTGTTAAGGGATCATCACGTTCAGTTGCAAACCCCGAAGCCCAACGCGCTTTGATTGCTCACTGGCAGGGAATAGTGAAGAGCTTAGGAAACTTTCTAAATGCGTTGAAAGAAAATCATGTTCCTCCATTTTTAGTTCGTAAGGTGTTCACACAAATTTTTTCTTTCATCAATGTACAATTATTCAATAGTCTTCTTTTAAGACGGGAGTGCTGCTCATTTAGTAATGGAGAATATGTCAAAGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAGGCAACTGATGAGTATGCAGGTTCAGCCTGGGATGAGCTCAAACATATTAGACAAGCTATTGGATTTCTGGTCATACATCAGAAACCAAAGAAAACATTGGATGAAATAAGCCATGACCTGTGCCCAGTCCTTAGTATACAGCAGCTATATCGGATAAGCACCATGTATTGGGATGACAAATACGGAACGCATAGTGTGTCCTCCGATGTAATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCGTTTTCTGTTGATGACATATCGAAATCAATGGAGCAGATAGATATCGCAGATATAGAGCCCCCGCCTCTAATTCGTGAAAACTCTGGCTTTAGCTTTTTGTTGCCACGCCCAGATTGA 4599 0.4042 MGTPVNIVVGSHVWIEDPEVSWIDGQVLKINGKDAEIEATNGKKVVANLSKIYPKDMEAPPGGVDDMTKLSYLHEPGVLQNLKARYELNEIYTYTGNILIAINPFQRLPHIYGAHMMQQYKGAPFGELSPHVFAVADVAYRAMINEKKSNSILVSGESGAGKTETTKMLMQYLAFLGGRAGTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLGNPRSFHYLNQSKCYELADVSDAREYLATRRAMDIVGISQKDQEAIFRVVASILHIGNIEFTKGKDIDSSVPKDDKSKFHLKTTAELLMCDADALEDALCKRVMITPEEVIKRSLDPQSAAISRDGLAKTIYSRLFDWLVDKINNSIGQDPNSKSLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRTDFTIAHYAGEVLYQSDQFLDKNKDYVVPEHQDLLSASKCYFVSGLFPPLPEETSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNQLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGILATEAMEANCDEKAGCQKILEKMGLHGYQIGKTKVFLRAGQMAELDARRAQVLGNAAKVIQRCVRTHQARKHYLALRKKSIYVQSRWRGRLACKLYEHLRREAAARKIQKNVRRYESRKAYKELHVSALTLQTAIRAVAARKKFRFKKQTKASIIIQARWQCHKAALYHKRLKKGAIVTQCRWRGRIARKELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKGLRTNLEESKAQEIAKVQNLLQEMQNKFEETNALLIKERENAKKVVEEAPPVIKETQVIVEDTQKIEKLNAEVESLKTSLKSEKQKADDFERKYNETQVCSEERGKKLEDTEKKTRQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIIQRTESGHIVQEAKTTLPNQEMHSKSMHRREPSDGLDDKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAAFIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRHRSSATLFGRMTQSFRGAPAGVNVSLINGNTSRGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANPEAQRALIAHWQGIVKSLGNFLNALKENHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSSDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDIADIEPPPLIRENSGFSFLLPRPD* 1533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1501 1532 Coils Coil 1017 1051 - -
Gso10g1501 1532 Coils Coil 877 904 - -
Gso10g1501 1532 PANTHER MYOSIN 6 1529 - -
Gso10g1501 1532 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso10g1501 1532 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Gso10g1501 1532 CDD MYSc_Myo11 76 720 IPR036018 -
Gso10g1501 1532 SMART iq_5 805 827 IPR000048 GO:0005515
Gso10g1501 1532 SMART iq_5 853 875 IPR000048 GO:0005515
Gso10g1501 1532 SMART iq_5 782 804 IPR000048 GO:0005515
Gso10g1501 1532 SMART iq_5 734 756 IPR000048 GO:0005515
Gso10g1501 1532 SMART iq_5 757 779 IPR000048 GO:0005515
Gso10g1501 1532 SMART iq_5 830 852 IPR000048 GO:0005515
Gso10g1501 1532 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Gso10g1501 1532 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g1501 1532 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Gso10g1501 1532 Gene3D - 735 784 - -
Gso10g1501 1532 Gene3D - 785 831 - -
Gso10g1501 1532 Gene3D - 832 882 - -
Gso10g1501 1532 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Gso10g1501 1532 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Gso10g1501 1532 Gene3D - 667 733 - -
Gso10g1501 1532 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g1501 1532 ProSiteProfiles IQ motif profile. 737 762 IPR000048 GO:0005515
Gso10g1501 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Gso10g1501 1532 CDD MyosinXI_CBD 1114 1498 IPR037975 GO:0007015
Gso10g1501 1532 Coils Coil 968 1002 - -
Gso10g1501 1532 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g1501 1532 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g1501 1532 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g1501 1532 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g1501 1532 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g1501 1532 PANTHER MYOSIN-9 6 1529 - -
Gso10g1501 1532 MobiDBLite consensus disorder prediction 1072 1090 - -
Gso10g1501 1532 Pfam Myosin N-terminal SH3-like domain 10 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso10g1501 1532 Gene3D - 439 623 - -
Gso10g1501 1532 Gene3D - 252 310 - -
Gso10g1501 1532 Coils Coil 912 950 - -
Gso10g1501 1532 ProSiteProfiles Dilute domain profile. 1163 1475 IPR002710 -
Gso10g1501 1532 SMART MYSc_2a 57 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso10g1501 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 785 IPR027417 -
Gso10g1501 1532 Gene3D Kinesin motor domain 65 662 IPR036961 -
Gso10g1501 1532 MobiDBLite consensus disorder prediction 1072 1115 - -
Gso10g1501 1532 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Gso10g1501 1532 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Gso10g1501 1532 SMART DIL_2 1350 1457 IPR002710 -
Gso10g1501 1532 Pfam DIL domain 1351 1454 IPR002710 -
Gso10g1501 1532 MobiDBLite consensus disorder prediction 1091 1114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1501 Gso-Chr10 41421068 41439895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1501 1 1532 Myosins gene family AT1G54560 82.790 0.0 2659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1501 K10357 - gmx:100792816 2994.53