Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1494 ATGTACATCCACGTGTGTCTTTGGTTGGTGTTATGTTTCCCTGTTTTCTTAAACGCCGTACCCCCCGACAAAGGTGGCGGCGATTCCTTGATGTTGGGGTGTGGATTAGGCGAAGGTGGAGGCAAAGATAGCGACGGAAGACAATGGACGCCCGACAACAAATACCTCTCTGGTGGCAATTCCGTCACTTCCAAAGCCTCTTTCCAAGACCCTTCGCTTTTGTCCGAGGTTCCGTACATGACATCTCGTGTTTTCACCTCCGAAGCAACCTACAAGTTCCCCGTTAAACTCGACAAACGTTACTGGCTCAGGCTCCATTTCTACCCTGCAGTTTACAACACCTTCGACCCCGTCAATTCATATTTCTCCGTCACAGCAAACAGCGTTACGCTTCTTTCCAATTTCAGCGCCTCCATCACATGCCAAGCTCTCTCCCAAGCCTACCTCGACAGAGAGTATTCCCTCGCGCCTTTGGATTCGGACACTCTCTCCCTTACCTTCAAACCCTCTGGGAAACAGAATGGTGCTTTCGCTTTTGTTAATGGGATTCAACTTATTGAAATGCCGGAGTTGTTTGATTCGGCTCCTATGGTGGGGTACTCCGACCAAACCATGGATACAAAAAGTTTTCATTTTCAGACAATGTTCAGATTAAATGTTGGTGGACAATTTATATCTCCGAAACAAGATTCTGGTCTAAGCAGAATGTGGTACGATGATACACCTTATTTATACGGTGCTGCCACTGGTGTCACCAACCACGCTACCAAGGATGTCAAAATTGACTACAAAACCATGCCACAGAACATTGCTCCTCCTATTGTGTACTCTACTTCAAGATCCATGGGGAACAATAAGGACGTCAACATGGGGTTCAATCTCACGTGGATCTTCCATGTTGATCCGGGTTCGATGTACCTTACACGATTGCATTTTTGTGACTATTACTATTCCAAGGTGAATGAAATTGTTTTCAAAATCTTCATCAACAATCAAACAGCGGAGGCTGAAGCTGATGTGATTGGGTGGACAGGAGGTAAAGGAGTGGCAACTTATAAAGATTATGTGATATATGTGAAAGATGAGGCAGGTGATGATCAACTCTGGCTTGCTTTGCACCCTGCACCTGAAACGGAGCCAGAATTTTATGATTCGTTACTTAATGGGGTGGAGGTGTTCAAGCTCAATGACACGGATTTATCTGGTCCCAATCCTCAACCTTCGGAGATGTTGATTGAACATGAGGAGCATGCAAAGACTTTCCAAAACAAACATGGTAGTAATAAGACTTTTGTTATTGGCAGTGCTGCAGGGGGTGCTGCAGGTTTTGCCTTAATGGCTGCAATAATTGTTGTTGTTCAACACCAAAAGAAAAAGAGAGCTCCGGGATCGTACAGCACATCAAGCTGGCTACCTATTTATGGGAATACGCACACCGCAGGCACCAAAACCACAGGGTCAGGGAAGAGTGTTGGCAGTGCCAACATATCAGCCATGGCTCAAGGATTGTGTCGCTATTTCTCCTTGCAAGAGATGAAGGAAGCGACCAAGAATTTCGACGAGTCCAATGTGATAGGGGTAGGAGGGTTTGGAAAGGTTTACAAGGGTGTTATTGATAATGGGTTCAAAGTGGCAATCAAAAGATCGAACCCGCAATCAGAACAAGGAGTGAACGAGTTCCAGACTGAGATTGAGATGTTGTCCAAGTTGAGACACAAGCATCTGGTGTCCTTGATAGGTTTTTGCGAGGAGGATGATGAGATGTGTTTGGTTTATGACTACATGGCACTTGGCACCATGAGGGAACACCTTTACAAGGGAAACAAGCCATTAGACACACTATCTTGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCAAGAGGCCTTCACTACCTTCACACGGGTGCAAAGTACACCATCATTCATAGAGATGTCAAAACAACCAACATTCTCCTTGATGAAAATTGGGTTGCCAAGGTTTCAGATTTTGGACTTTCCAAAACGGGTCCAAACATGAACCAAGGTCATGTTAGTACTGTGGTGAAGGGTAGCTTTGGATACTTGGATCCTGAATATTTTAGGAGGCAACAGTTGACTGAGAAATCGGATGTGTACTCATTTGGGGTTGTTTTGTTTGAGGCACTTTGTTCAAGGCCTGCTCTCAATCCTAGCCTTGCAAAGGAACAGGTAAGCCTTGCGGAATGGGCATTGTACAACAAAAGAAGAGGAACACTTGAGGACATCATTGACCCCAACATCAAAGGACAGATCAACCCTGAAAGCTTGAAAAAGTTTGCTGATGCAGCTGAGAAGTGTGTGTCTGATCTTGGTTTCGAACGCCCCTCCATGAATGATCTCTTGTGGAATCTCGAATTTGCTCTCAATGTGCAACAAAACCCCGATGGTAAAACTCACGAACCGCGTCTTGATGAAAGTGAGTTTGAAGAAGTAAACTTGGAAAACAATGACATGGCAGCTCACTACAAAAACCTTAGCCTTGGAAGTGAGCATGACCTTAGCCACGAGTCCAGTAGTGATAACCATGCTTCCATCTTCTCGCAAATTGCCAATCCAAAAGGACGATGA 2589 0.4511 MYIHVCLWLVLCFPVFLNAVPPDKGGGDSLMLGCGLGEGGGKDSDGRQWTPDNKYLSGGNSVTSKASFQDPSLLSEVPYMTSRVFTSEATYKFPVKLDKRYWLRLHFYPAVYNTFDPVNSYFSVTANSVTLLSNFSASITCQALSQAYLDREYSLAPLDSDTLSLTFKPSGKQNGAFAFVNGIQLIEMPELFDSAPMVGYSDQTMDTKSFHFQTMFRLNVGGQFISPKQDSGLSRMWYDDTPYLYGAATGVTNHATKDVKIDYKTMPQNIAPPIVYSTSRSMGNNKDVNMGFNLTWIFHVDPGSMYLTRLHFCDYYYSKVNEIVFKIFINNQTAEAEADVIGWTGGKGVATYKDYVIYVKDEAGDDQLWLALHPAPETEPEFYDSLLNGVEVFKLNDTDLSGPNPQPSEMLIEHEEHAKTFQNKHGSNKTFVIGSAAGGAAGFALMAAIIVVVQHQKKKRAPGSYSTSSWLPIYGNTHTAGTKTTGSGKSVGSANISAMAQGLCRYFSLQEMKEATKNFDESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDDEMCLVYDYMALGTMREHLYKGNKPLDTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCSRPALNPSLAKEQVSLAEWALYNKRRGTLEDIIDPNIKGQINPESLKKFADAAEKCVSDLGFERPSMNDLLWNLEFALNVQQNPDGKTHEPRLDESEFEEVNLENNDMAAHYKNLSLGSEHDLSHESSSDNHASIFSQIANPKGR* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1494 862 Gene3D Phosphorylase Kinase; domain 1 480 594 - -
Gso10g1494 862 Pfam Malectin-like domain 33 394 IPR024788 -
Gso10g1494 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Gso10g1494 862 MobiDBLite consensus disorder prediction 836 862 - -
Gso10g1494 862 SMART serkin_6 519 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1494 862 PANTHER OS07G0166700 PROTEIN 24 848 IPR045272 GO:0004714|GO:0006468
Gso10g1494 862 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 24 848 - -
Gso10g1494 862 SUPERFAMILY Protein kinase-like (PK-like) 496 794 IPR011009 -
Gso10g1494 862 Pfam Protein tyrosine and serine/threonine kinase 523 720 IPR001245 GO:0004672|GO:0006468
Gso10g1494 862 CDD STKc_IRAK 525 792 - -
Gso10g1494 862 Gene3D Transferase(Phosphotransferase) domain 1 595 813 - -
Gso10g1494 862 ProSiteProfiles Protein kinase domain profile. 519 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1494 862 Gene3D - 211 394 - -
Gso10g1494 862 Gene3D - 32 189 - -
Gso10g1494 862 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1494 Gso-Chr10 41327004 41330318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1494 28 862 Receptor kinase-like Gene Family AT3G51550 53.272 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso10g1494 Malectin_like 1.5e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1494 - - gmx:100791236 1697.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2069 19 49248467 49251784 Gso10g1494 10 41327004 41330318 PCT
Gso3g2108 3 46383168 46386562 Gso10g1494 10 41327004 41330318 PCT
Gso10g1494 10 41327004 41330318 Gso19g2069 19 49248467 49251784 PCT
Gso10g1494 10 41327004 41330318 Gso3g2108 3 46383168 46386562 PCT