Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1473 ATGTTCGATGGAGTACCAGACCAGTTCCACCAATTCATAACTCCAAGGACCTCACAACCTCTTCACTTACCTTTCCCTCTCCATGCTTCAGGAACCCCCAATACCACCTTCCCTTCCAATTTTGATCCTTATAACAACCCTTCTCATCAATTGCCACTCCAACCCAACAACCTCTTGCACCCATTACACCACAAAGATGAAGAGAAGGAAGAAAACACAACCACCGTCCCAATGAACTTCGAAATCCAAAGAGATCAAAGGCAACAACTTCCTGAACTAATTGATCCCTGGACTACCGATGAAGTGCTTACCCTCTTGAGGATCAGATCTAGCATGGAAAGTTGGTTCCCAGAACTCACTTGGGAACATGTCTCAAGGAAACTAGCAGAGCTTGGATATAAGAGGAGTGCAGAGAAGTGCAAGGAGAAGTTTGAAGAAGAGAGTAGATATTTCAACAACAACATCAATTACGCCAAGAATAACAATAATAGTACCAGCAATTATCGGTTTCTTAGTGAGCTTGAACAACTTTATCACCAACAAGGGAGTAGTGGTGATCATCTTGAAAAGATGACTCAGCCACCACTGCAGAAACAAGGCAGGATGGACCACCATGCATTGGAATTGGAAGAGGAAGAAGGGGATTCGAGAAACGTTATTGTTGACGCATCGGTGACAAAAATACAAAGCGACGAGGCACTTGCGGTGGAAAAGATCACAAAGGACCGCAAGAGGAAGAGGTCTGATAGGTTTGAGATGTTCAAGGGTTTTTGCGAGAGCATTGTGCACAAGATGATGACTCAGCAAGAAGAGATGCACAACAAGCTCCTTGAGGACATGATGAAGAGAGATGAAGAGAAGTTCACCAGAGAGGAAGCTTGGAAGAAGCAAGAGATGGAGAAGATGAACAAGGAGCTTGAGATGATGGCACGTGAGCAGGCTGTTGCAGGTGATAGACAAGCCAAAATTATCCAAATCCTGAACAAATTCTCAGCCACTACTTCGTCCCCTGCAAGCCACACCCTCAAGAAGGTAAACACCCACATTTCACAAAACCCTAATCCTTCACAAACAGAAAACCCTACTTTAAGTGTTGCACAAGACACACTGATTCCTTCTACTTCTTCTACTTCAACTCCAGCTCCAGCTCCTCCCCAGAACCCTAGTTCTTGTTCTCTAAATAGCCAGAATAATAATCATATTAATAATAATATTCCAGTAGAGAAAAATTCGATTTTGAATAAGGGGTCCTCATCAAATGAGAAAGACGATGTTGGGAGAAGGTGGCCAAAGGATGAAGTGTTGGCACTCATAAACCTGAGGTGCACCAGTGTGAACAACAACAACAACAATGAGGAGAAGGAAGGGAACAACAAGGTCCCTCTGTGGGAGAGAATCTCACAAGGGATGTCGGAGTTGAGATACAAGAGGAGTGCAAAGAGGTGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAGGAAAACCAAGGATATTACTAAGAAGAGGTCCCTTGACTCAAGAACTTGTCCCTACTTTCATCAGTTGAGCAGTCTCTACAATCAAGGAAAACTCGTTCTACAATCTGAAAGCCACTTGAATAATACTCCACCTGATCAGAATCCCGAGCAAGTAAAACCAGATCAAACAACACAAGCTCATGAGTCTTCTTCGCAGGTGGGGTCTGGTAGTGGTTTCAGTGTTCAGCAACAGCAGGTACCTTCTTTGGATTTTGATCAGTTTTAA 1746 0.4359 MFDGVPDQFHQFITPRTSQPLHLPFPLHASGTPNTTFPSNFDPYNNPSHQLPLQPNNLLHPLHHKDEEKEENTTTVPMNFEIQRDQRQQLPELIDPWTTDEVLTLLRIRSSMESWFPELTWEHVSRKLAELGYKRSAEKCKEKFEEESRYFNNNINYAKNNNNSTSNYRFLSELEQLYHQQGSSGDHLEKMTQPPLQKQGRMDHHALELEEEEGDSRNVIVDASVTKIQSDEALAVEKITKDRKRKRSDRFEMFKGFCESIVHKMMTQQEEMHNKLLEDMMKRDEEKFTREEAWKKQEMEKMNKELEMMAREQAVAGDRQAKIIQILNKFSATTSSPASHTLKKVNTHISQNPNPSQTENPTLSVAQDTLIPSTSSTSTPAPAPPQNPSSCSLNSQNNNHINNNIPVEKNSILNKGSSSNEKDDVGRRWPKDEVLALINLRCTSVNNNNNNEEKEGNNKVPLWERISQGMSELRYKRSAKRCKEKWENINKYFRKTKDITKKRSLDSRTCPYFHQLSSLYNQGKLVLQSESHLNNTPPDQNPEQVKPDQTTQAHESSSQVGSGSGFSVQQQQVPSLDFDQF* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1473 581 MobiDBLite consensus disorder prediction 29 47 - -
Gso10g1473 581 MobiDBLite consensus disorder prediction 388 404 - -
Gso10g1473 581 MobiDBLite consensus disorder prediction 23 47 - -
Gso10g1473 581 Pfam Myb/SANT-like DNA-binding domain 95 176 IPR044822 -
Gso10g1473 581 Pfam Myb/SANT-like DNA-binding domain 427 518 IPR044822 -
Gso10g1473 581 MobiDBLite consensus disorder prediction 531 581 - -
Gso10g1473 581 PANTHER - 13 572 - -
Gso10g1473 581 Gene3D - 97 153 - -
Gso10g1473 581 Gene3D - 429 495 - -
Gso10g1473 581 ProSiteProfiles Myb-like domain profile. 96 148 IPR001005 -
Gso10g1473 581 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 13 572 - -
Gso10g1473 581 CDD GT1 427 497 - -
Gso10g1473 581 ProSiteProfiles Myb-like domain profile. 428 490 IPR001005 -
Gso10g1473 581 MobiDBLite consensus disorder prediction 371 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1473 Gso-Chr10 41110507 41113033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1473 1 522 Trihelix Transcription Factor Family AT5G28300 40.333 5.04e-101 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso10g1473 Myb_DNA-bind_4 3.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1473 - - gmx:100137081 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2050 19 49082205 49085838 Gso10g1473 10 41110507 41113033 PCT
Gso3g2090 3 46247513 46251092 Gso10g1473 10 41110507 41113033 PCT
Gso10g1473 10 41110507 41113033 Gso19g2050 19 49082205 49085838 PCT
Gso10g1473 10 41110507 41113033 Gso3g2090 3 46247513 46251092 PCT