Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1464 ATGAATGGGGTCACACACCTTGAACCAGATGAGTCTGAGTTTGTTGAAGTTGATCCAACTGGCAGATATGGCAGATACAATGAAATCCTTGGCAAAGGAGCTTCAAAGACAGTATATAGAGCATTCGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAGTTGTATGATTTCCTGCAAAGCCCTGAAGATCTTGAGAGGCTTTACTGTGAAATTCATCTCCTGAAAACATTGAAGCACAGAAACATTATGAAGTTCTACACTTCTTGGGTCGATACTGCTAATAGGAACATCAACTTCGTGACTGAAATGTTCACATCCGGTACACTTAGACAGTATAGGCTAAAGCACAAGAGAGTTAACATCAGAGCAGTGAAGCATTGGTGTAGACAGATCTTGAGCGGACTTCTCTATCTTCATAGTCACGACCCACCGGTGATCCATAGAGATCTAAAATGTGATAATATTTTTGTCAATGGAAACCAAGGGGAAGTGAAGATTGGGGATCTTGGTTTGGCAGCAATTCTCCGGAAATCTCATGCTGCTCATTGTGTAGGGACGCCTGAGTTCATGGCCCCTGAAGTATATGAAGAGGCATACAATGAGTTAGTTGACATATATTCCTTTGGGATGTGCATATTAGAGATGGTTACATTTGAATATCCTTATAGTGAATGTACTCATCCGGCTCAAATCTACAAAAAAGTTATTTCTGGGAAAAAGCCAGATGCTTTGTATAGAGTGAAGGATCCAGAAGTGCGGCAATTTGTTGAGAAATGCTTGGCCACAGTGTCTCTAAGGCTTTCTGCAAGGGAGCTTTTAGATGATCCATTTCTTCAAATTGACGATTATGAATATGATTTGAGAACTGTAGACAATGGGGAATTGGATGAATTTGGTCCTCTCATGAGACAGCCATTCTTTGATCTTCATCGAAGCTATAGTAACTTCAGTAATGAATACACGAATGGCTTTGGGTACGAAGGAGACTGGGGTCCTCATCCGGCTGAGATCGAACCTAGTGGAATTGAACTTTTTGAGTACCGTGATGATGATGAACCCTCTGAAGATGTTGACATAAGCATCAAGGGCAAGAGGAAAGATGATGGTGGTATCTTTTTGAGACTAAGAATTGCTGATAAAGAAGGTCGCATCCGAAATATTTATTTCCCATTTGACATAGAGATGGACACAGCAATAAGTGTGGCAACTGAAATGGTTGCAGAGCTGGACATGACTGATCAGGATGTTACCAGAATAGCAGATATGATAGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAGACCAGGACCAGGAATTGATGAGACTCCCCGTTTTGCTAATCAAGGTTTATGTCACAATTGTGTGTCTAATCATACTTCTAGCGGTTCTTTTCTGGATTTTCTTTCAAACAATCCAGATAACAAGAACTTGCAACTTCTCGATTGTTGTAGGCATGGATGTGCTTCAATGCATGGACGGTTTGGGGAGATTACCTTCCAATCTGAAGAGTATGACAATCATGCTAGAGGGGATCTGAACATATCAAGCCAATTAGACAGCTTGCAGTATCAGGAGTTATGGAATCAGCATGAAAGTCGTGAATTGAGTCCGGTAGAGTCTGATCAAAGTCATTCTGATGAACAATATGAGCAATTAGATAAACTGATTCTTGCTAAAGACAAAGCACAGGATGTTTGGGAAGACAAGTTTTCCCTCAATGCAGCAAATTCTCTAAGAAATTTATCAGGAAGTCATGATTTCTCTACTATCCGATCGACCTATTGTGACCTTGAGGATGACTATGAGAAAGAGATCCAAAAGGAACTCAGATGGCTCAGAGCCAAGTACCAAATGGAGTTAAGGGATCACAAGGATCGACAGTTTGGGCAATGTTCGCATAGTTGTAACAGTGAGCACAGAACAGAAAATGGCTTTTTGTCACCTTCACTGACAGAAACATTAAAAGGAGGCAACAATGGGACTCAGTTGAAACCCATTACTACCAAGTGGAATTGTGATTCCAGTAGTCACCCTCATGTCCATGAAAGCAGCCCCAATTCGGACACCCAAAGGGCCCAAAATTGTGTGGCGATTAAATCCCCTGGAGAAGGTATGGTTACTGCAAAGAGTTTTTACACGGGCTCATTGCTTCCACACTCTTTGCACAGGACAGTTTCCCTCCCAGTTGATGCTGTTGATATATAA 2217 0.4159 MNGVTHLEPDESEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILSGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYRVKDPEVRQFVEKCLATVSLRLSARELLDDPFLQIDDYEYDLRTVDNGELDEFGPLMRQPFFDLHRSYSNFSNEYTNGFGYEGDWGPHPAEIEPSGIELFEYRDDDEPSEDVDISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIEMDTAISVATEMVAELDMTDQDVTRIADMIDGEIASLVPEWRPGPGIDETPRFANQGLCHNCVSNHTSSGSFLDFLSNNPDNKNLQLLDCCRHGCASMHGRFGEITFQSEEYDNHARGDLNISSQLDSLQYQELWNQHESRELSPVESDQSHSDEQYEQLDKLILAKDKAQDVWEDKFSLNAANSLRNLSGSHDFSTIRSTYCDLEDDYEKEIQKELRWLRAKYQMELRDHKDRQFGQCSHSCNSEHRTENGFLSPSLTETLKGGNNGTQLKPITTKWNCDSSSHPHVHESSPNSDTQRAQNCVAIKSPGEGMVTAKSFYTGSLLPHSLHRTVSLPVDAVDI* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1464 738 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Gso10g1464 738 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1464 738 MobiDBLite consensus disorder prediction 675 695 - -
Gso10g1464 738 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 727 - -
Gso10g1464 738 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 375 428 IPR024678 GO:0004674|GO:0005524
Gso10g1464 738 CDD STKc_WNK 22 281 - -
Gso10g1464 738 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Gso10g1464 738 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1464 738 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1464 738 Gene3D - 372 437 - -
Gso10g1464 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Gso10g1464 738 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Gso10g1464 738 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1464 Gso-Chr10 41035077 41038778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1464 127 632 MAP Kinase Kinase Kinase AT3G04910 60.367 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gso10g1464 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1464 K08867 - gmx:100775959 1520.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2044 19 49035177 49038609 Gso10g1464 10 41035077 41038778 PCT
Gso3g2085 3 46200403 46204020 Gso10g1464 10 41035077 41038778 PCT
Gso10g1464 10 41035077 41038778 Gso19g2044 19 49035177 49038609 PCT
Gso10g1464 10 41035077 41038778 Gso3g2085 3 46200403 46204020 PCT