Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1461 ATGTCAGTTTCTACATTTGTAGGCTTTGAATTCCCCAGTTTTGAAAGTGCTCATCCTGAAATGTTGGGTCGGTGGGGGAGGGTGGAAAGGTGGGATAGGGTGGTGGGTGATTGTGTTGTTGAAATTCGTGGGACCGAAGGAGGAGAAGCTGTGTACAAGGGAGTTGTGGAGGGAAGTGAAAATCATCAAATGCACAACTGCCATAAACGAACAAACGGCTACCTTGACACTCTAATATGCGAAAAAAGGAAATGTGATATCTCCTCAACAATGCTTTCCCGGTTGGTTTCTTGGATCTTGTCGCCCTCCTCTTCTGAAGAAGAAGAAGAAATCCTTGACATCATCAAAGATAATGACATTAACCATGAAAACGACCAAAAGTTCAACGTAGAAGATGACAAGAACGACCATTTTCTTAACTCATGCGATGTGGACGACACCATTCCCATTGCACTTGCCGTTCCCAATGCCTCCCCCGCCGTGACAGTGGCCTTCCCGGCCAATGACGAAAGAAACACCGTCCCAACCACCGCCACTGTGGCCACTATAGTAACACGCTCAAAAGGGCAGCGCAACGCCAAGTATTCCGGAATGGTGAGACAATACCAAAGGCTGTGGACGAAGGAGGATGAGATGGAACTGTTGAAGGGATACCTTGATTACGTCAAGCAGCATAGAAAGGAAACCACCACCCTTCAAAACGTCGTAGTTTCATTGTATGATCACGTAAGGCCCAAACTAAACATCGATTTCAACAGAAACCAGCTTGTTGAGAAACTGCGTAGGTTAAAGAGAAAACACAAGTTGGCTTTGGGAAAAGGCAAGGACAAGGAGGTTCCCTTTAGGAACCCCCAGGAGCAGGCCATTTTTGAAATTTCCCACAAGATTTGGGCCAATGACACAGATAATATAATAGTCCAAGATGCCTTGGATGGTGATGAATCAGGACACACTCCTGAAAGTCATGATCATGTTGGCAACGTCAAGGTGAAGATTGAACAAGTTGACAACAGTGATGAAATAGGCAATAGAGTGCCAAAGCGGTTGCGGCTAGATGATGCAGACGATATGAACAGAACAAATGACCAGAACAATGGTGATAGCATACAAGGCTTCATTGAGGACACCATGAGGTCCTGTTTCTCACCATTGCTGAAGGAAGTGTTGGATGAAGCACAGGAAGAGTCACTTCCTGAGTTGGAGGCAATCCCAATGCCGCTATGCTCCGGGGAAGTGGACCATGAACAATGGAGAAAACGGAGGATTTTGGAGTTGGAGGTGTATGTGAAGCGGTTGGAGTTGTTGCAGAATCAGATCAAGTCTAGATTGGAAGAGTTGCGATCTAGCTGA 1350 0.4607 MSVSTFVGFEFPSFESAHPEMLGRWGRVERWDRVVGDCVVEIRGTEGGEAVYKGVVEGSENHQMHNCHKRTNGYLDTLICEKRKCDISSTMLSRLVSWILSPSSSEEEEEILDIIKDNDINHENDQKFNVEDDKNDHFLNSCDVDDTIPIALAVPNASPAVTVAFPANDERNTVPTTATVATIVTRSKGQRNAKYSGMVRQYQRLWTKEDEMELLKGYLDYVKQHRKETTTLQNVVVSLYDHVRPKLNIDFNRNQLVEKLRRLKRKHKLALGKGKDKEVPFRNPQEQAIFEISHKIWANDTDNIIVQDALDGDESGHTPESHDHVGNVKVKIEQVDNSDEIGNRVPKRLRLDDADDMNRTNDQNNGDSIQGFIEDTMRSCFSPLLKEVLDEAQEESLPELEAIPMPLCSGEVDHEQWRKRRILELEVYVKRLELLQNQIKSRLEELRSS* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1461 449 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 91 449 - -
Gso10g1461 449 Coils Coil 425 449 - -
Gso10g1461 449 PANTHER BNAANNG10740D PROTEIN-RELATED 91 449 IPR007592 GO:0006355
Gso10g1461 449 Pfam Protein of unknown function, DUF573 203 297 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1461 Gso-Chr10 41017628 41019396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1461 151 448 GeBP Transcription Factor Family AT5G28040 33.518 2.39e-42 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gso10g1461 DUF573 7.2e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1461 - - gmx:102662842 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2041 19 49013437 49015168 Gso10g1461 10 41017628 41019396 PCT
Gso3g2082 3 46183847 46185685 Gso10g1461 10 41017628 41019396 PCT
Gso10g1461 10 41017628 41019396 Gso19g2041 19 49013437 49015168 PCT
Gso10g1461 10 41017628 41019396 Gso3g2082 3 46183847 46185685 PCT