Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso10g1451 | ATGAGTGAGAGAGTGAAGAAAGAAAAGCAAACGGGGGAGAAAAGGGAGAGGATGAAGAACATCTTCAAGAAGCTGCACATAGGTAGCAGCCACGATCCTCATCGATCCAATGAGGCTTCACCGTCTGTGCCGTCGCCGCCGTGCGTTGCCGATCAGTCCCAGAGCTCCGCCGCCACTCCGGCGAGTCCTTCGTCGGCGTCGGCGTCGGCGTCCACGGTGGTGGTGACTCCCGGAGGAGGAGGCGGCGGCGCGAGTCCGGTGATGAATCGGCAGGACTTTTTCTCGTCGGAGGAGGAGTTTCAGGTTCAGCTAGCCCTAGCTATCAGCGCTTCGAATTCGGAGTTCCGTGAGGATCCTGAGAAGGATCAGATCCACGCGGCGACGCTTTTGAGCTTGGGAGGCCATCGAATCGATTCGGCGCGGAACAAGGATGATGTGGCGGAGGCGCTGTCGAGGCAGTACTGGGAATATAATGTGCTTGACTATGAGGAGAAAGTGGTAGATGGTTTTTATGATGTATATGGGCCCTATAATGATTCAGTAATGCAAGGAAAGATGCCATCTCGAACAGATCTTGAAGCAAACCCTGGAGGTTCTGAGTTGGTCATTGTTAATCGAACAATTGATCCTTCTCTGGAGGAACTGATACAAATTGCACAATGCATTGCATTAGACTGCCCTGTCTCTAGTTTGGTACAAAGGCTTGCTGAACTTGTTACAAGTCATATGGGTGGTCCTGTAAAGGATGCTAGTATTATGTTAGCAAGATGGACAGAAACAAGAGCAGAGTTAAAGACATCTCTTCACACAATTGTATTGCCTCTTGGGTCCTTAAATATTGGGCTCTCTAGGCATCGTGCTTTGCTTTTCAAGGTATTAGCTGACAACATTAATATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTCGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCAGGGACACTTATCCCAGCTGATATTTTAAGCACCAAGGATAGTGCCTTTAAGCCTTACAATCCCAAGATTTGGCCAAGTTTACCCTCCACTAAGGATAATGAATTTTCTTACTCAAGACCTATCCAACCATCTCATGGTGAAGGTAGTAGTCAAAATTCTGTGGTAAAAGATTATTCACTGCCCTGGAATGGAAAACCATATTTTGAGAAGTCAGAGCCTTCAAACTTAGGTTTGAGTAGAGACAGTGGCGTTGGTCCTTCTAAAATTCCTAATAAAGGGACTCCTAACCAACTAGAAAATTTGCCAGCCTTGTCTGGTACTTCTCTGTACAAAGGGACTCTTGGAATGAATACAGTTGGTGATGGGACAAGATTGAATGTCAATGTTGTACCATATACTAATAACAGCCCCAATGACTCTCGGAACCTTTTTGCAGATCTTAACCCATTCCAAATAAAAGGAATGGGGAAGGCCCCTGTGCATAACAAACCTGTGGAAAATAAACCTCCTGAGCTTAAAAGTACTAAAAACAATGCTGTTTCTGGTCGACCCCCAGTGCCACTGATGTGGAAGAATCGTCATGCTTACAATGAAGACCCCAGGAAAACTAATCATAATCCTAATGAATACAACCCTCCCTTATTTGTTTCCAATGGTTCTTCTATGTCTGAAATTATTGACCTTAGTAGTTCCAAGCCGTTGTATAATTCAAATATAAATAATGATGTAAATGCTCAAACTTTGGCGCAAGTTACTGGTTCAGTTTCACCACCTAATCATGACCAGAGGAACTGTACATATGACAGATTCATGGGAAGCAATTTGAAATTAAAAGATCCAGAGAGTCCTAGCTCATCAATTGATTCCATCACAAACAGGGTTGATCAAATATTGGATGATGTAGATGTTGGTGAATGCGAGATTCCATGGGAGGATCTGGTTCTTGGTGAAAGAATTGGTATAGGTTCATATGGAGAGGTATACCATGCTGACTGGAATGGCACGGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCAGGCGCTGCATTATCAGAATTCAAAAGAGAAGTGCGGATAATGCGTAGGCTACGTCATCCAAATATTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCCAATCTGTCAATCATTTCAGAGTATCTACCAAGAGGAAGCTTGTACCGAATTCTTCATCGCCCTAATTGTCAGATTGATGAGAAACGAAGAATAAAAATGGCTCTGGATGTGGCTAGGGGCATGAATTGCTTACACACCAGCACACCTACAATTGTTCATCGAGATCTAAAGTCTCCAAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTATGTGATTTTGGGTTGTCACGGTTGAAGCACAACACTTTTTTGTCATCCAAGTCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAGCCCTCAAATGAGAAATGCGATGTTTATAGTTTTGGAGTCATCTTATGGGAGCTTGCCACTCTAAGGTTGCCGTGGAGTGGAATGAATCCTATGCAAGTTGTTGGTGCCGTTGGTTTCCAAAACCGCAGACTTGATATTCCTAAGGAAGTCGATCCTATAGTTGCAAGAATAATCTGGGAGTGTTGGCAACAGGATCCAAATTTGCGGCCCTCGTTTGCGCAACTCACAGTGGCTCTAAAGCCTCTACAGCGTCTGGTTATCCCATCTTATCAAGATCAGTTAGCTCCACCTATGCCGCAGGAGATTTCTGTAAATTCCACCCCCTGA | 2793 | 0.4443 | MSERVKKEKQTGEKRERMKNIFKKLHIGSSHDPHRSNEASPSVPSPPCVADQSQSSAATPASPSSASASASTVVVTPGGGGGGASPVMNRQDFFSSEEEFQVQLALAISASNSEFREDPEKDQIHAATLLSLGGHRIDSARNKDDVAEALSRQYWEYNVLDYEEKVVDGFYDVYGPYNDSVMQGKMPSRTDLEANPGGSELVIVNRTIDPSLEELIQIAQCIALDCPVSSLVQRLAELVTSHMGGPVKDASIMLARWTETRAELKTSLHTIVLPLGSLNIGLSRHRALLFKVLADNINMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPADILSTKDSAFKPYNPKIWPSLPSTKDNEFSYSRPIQPSHGEGSSQNSVVKDYSLPWNGKPYFEKSEPSNLGLSRDSGVGPSKIPNKGTPNQLENLPALSGTSLYKGTLGMNTVGDGTRLNVNVVPYTNNSPNDSRNLFADLNPFQIKGMGKAPVHNKPVENKPPELKSTKNNAVSGRPPVPLMWKNRHAYNEDPRKTNHNPNEYNPPLFVSNGSSMSEIIDLSSSKPLYNSNINNDVNAQTLAQVTGSVSPPNHDQRNCTYDRFMGSNLKLKDPESPSSSIDSITNRVDQILDDVDVGECEIPWEDLVLGERIGIGSYGEVYHADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEYLPRGSLYRILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPIVARIIWECWQQDPNLRPSFAQLTVALKPLQRLVIPSYQDQLAPPMPQEISVNSTP* | 931 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso10g1451 | 930 | ProSitePatterns | Protein kinases ATP-binding region signature. | 655 | 677 | IPR017441 | GO:0005524 | |
Gso10g1451 | 930 | ProSiteProfiles | Protein kinase domain profile. | 649 | 908 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso10g1451 | 930 | MobiDBLite | consensus disorder prediction | 34 | 74 | - | - | |
Gso10g1451 | 930 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 768 | 780 | IPR008271 | GO:0004672|GO:0006468 | |
Gso10g1451 | 930 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 147 | 340 | - | - | |
Gso10g1451 | 930 | Gene3D | Phosphorylase Kinase; domain 1 | 642 | 726 | - | - | |
Gso10g1451 | 930 | PANTHER | SERINE/THREONINE-PROTEIN KINASE EDR1 | 85 | 569 | - | - | |
Gso10g1451 | 930 | PANTHER | SERINE/THREONINE-PROTEIN KINASE EDR1 | 580 | 922 | - | - | |
Gso10g1451 | 930 | MobiDBLite | consensus disorder prediction | 407 | 439 | - | - | |
Gso10g1451 | 930 | SMART | serkin_6 | 649 | 904 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso10g1451 | 930 | Gene3D | Transferase(Phosphotransferase) domain 1 | 728 | 910 | - | - | |
Gso10g1451 | 930 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Gso10g1451 | 930 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 85 | 569 | - | - | |
Gso10g1451 | 930 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 580 | 922 | - | - | |
Gso10g1451 | 930 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
Gso10g1451 | 930 | MobiDBLite | consensus disorder prediction | 492 | 524 | - | - | |
Gso10g1451 | 930 | PRINTS | Tyrosine kinase catalytic domain signature | 723 | 736 | IPR001245 | GO:0004672|GO:0006468 | |
Gso10g1451 | 930 | PRINTS | Tyrosine kinase catalytic domain signature | 762 | 780 | IPR001245 | GO:0004672|GO:0006468 | |
Gso10g1451 | 930 | PRINTS | Tyrosine kinase catalytic domain signature | 809 | 819 | IPR001245 | GO:0004672|GO:0006468 | |
Gso10g1451 | 930 | PRINTS | Tyrosine kinase catalytic domain signature | 828 | 850 | IPR001245 | GO:0004672|GO:0006468 | |
Gso10g1451 | 930 | PRINTS | Tyrosine kinase catalytic domain signature | 872 | 894 | IPR001245 | GO:0004672|GO:0006468 | |
Gso10g1451 | 930 | SUPERFAMILY | Protein kinase-like (PK-like) | 639 | 923 | IPR011009 | - | |
Gso10g1451 | 930 | MobiDBLite | consensus disorder prediction | 370 | 392 | - | - | |
Gso10g1451 | 930 | MobiDBLite | consensus disorder prediction | 425 | 439 | - | - | |
Gso10g1451 | 930 | CDD | STKc_MAP3K-like | 655 | 898 | - | - | |
Gso10g1451 | 930 | Pfam | Protein tyrosine and serine/threonine kinase | 650 | 899 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso10g1451 | Gso-Chr10 | 40900369 | 40908407 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso10g1451 | 18 | 885 | MAP Kinase Kinase Kinase | AT1G08720 | 56.432 | 0.0 | 932 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL_CTR1-DRK-2 | Gso10g1451 | PK_Tyr_Ser-Thr | 2.5e-63 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso10g1451 | - | - | gmx:100817822 | 1815.43 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso10g1451 | 10 | 40900369 | 40908407 | Gso19g1420 | 19 | 43098392 | 43100610 | PCT | |
Gso10g1451 | 10 | 40900369 | 40908407 | Gso3g1428 | 3 | 40271930 | 40274324 | PCT |