Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1451 ATGAGTGAGAGAGTGAAGAAAGAAAAGCAAACGGGGGAGAAAAGGGAGAGGATGAAGAACATCTTCAAGAAGCTGCACATAGGTAGCAGCCACGATCCTCATCGATCCAATGAGGCTTCACCGTCTGTGCCGTCGCCGCCGTGCGTTGCCGATCAGTCCCAGAGCTCCGCCGCCACTCCGGCGAGTCCTTCGTCGGCGTCGGCGTCGGCGTCCACGGTGGTGGTGACTCCCGGAGGAGGAGGCGGCGGCGCGAGTCCGGTGATGAATCGGCAGGACTTTTTCTCGTCGGAGGAGGAGTTTCAGGTTCAGCTAGCCCTAGCTATCAGCGCTTCGAATTCGGAGTTCCGTGAGGATCCTGAGAAGGATCAGATCCACGCGGCGACGCTTTTGAGCTTGGGAGGCCATCGAATCGATTCGGCGCGGAACAAGGATGATGTGGCGGAGGCGCTGTCGAGGCAGTACTGGGAATATAATGTGCTTGACTATGAGGAGAAAGTGGTAGATGGTTTTTATGATGTATATGGGCCCTATAATGATTCAGTAATGCAAGGAAAGATGCCATCTCGAACAGATCTTGAAGCAAACCCTGGAGGTTCTGAGTTGGTCATTGTTAATCGAACAATTGATCCTTCTCTGGAGGAACTGATACAAATTGCACAATGCATTGCATTAGACTGCCCTGTCTCTAGTTTGGTACAAAGGCTTGCTGAACTTGTTACAAGTCATATGGGTGGTCCTGTAAAGGATGCTAGTATTATGTTAGCAAGATGGACAGAAACAAGAGCAGAGTTAAAGACATCTCTTCACACAATTGTATTGCCTCTTGGGTCCTTAAATATTGGGCTCTCTAGGCATCGTGCTTTGCTTTTCAAGGTATTAGCTGACAACATTAATATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTCGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCAGGGACACTTATCCCAGCTGATATTTTAAGCACCAAGGATAGTGCCTTTAAGCCTTACAATCCCAAGATTTGGCCAAGTTTACCCTCCACTAAGGATAATGAATTTTCTTACTCAAGACCTATCCAACCATCTCATGGTGAAGGTAGTAGTCAAAATTCTGTGGTAAAAGATTATTCACTGCCCTGGAATGGAAAACCATATTTTGAGAAGTCAGAGCCTTCAAACTTAGGTTTGAGTAGAGACAGTGGCGTTGGTCCTTCTAAAATTCCTAATAAAGGGACTCCTAACCAACTAGAAAATTTGCCAGCCTTGTCTGGTACTTCTCTGTACAAAGGGACTCTTGGAATGAATACAGTTGGTGATGGGACAAGATTGAATGTCAATGTTGTACCATATACTAATAACAGCCCCAATGACTCTCGGAACCTTTTTGCAGATCTTAACCCATTCCAAATAAAAGGAATGGGGAAGGCCCCTGTGCATAACAAACCTGTGGAAAATAAACCTCCTGAGCTTAAAAGTACTAAAAACAATGCTGTTTCTGGTCGACCCCCAGTGCCACTGATGTGGAAGAATCGTCATGCTTACAATGAAGACCCCAGGAAAACTAATCATAATCCTAATGAATACAACCCTCCCTTATTTGTTTCCAATGGTTCTTCTATGTCTGAAATTATTGACCTTAGTAGTTCCAAGCCGTTGTATAATTCAAATATAAATAATGATGTAAATGCTCAAACTTTGGCGCAAGTTACTGGTTCAGTTTCACCACCTAATCATGACCAGAGGAACTGTACATATGACAGATTCATGGGAAGCAATTTGAAATTAAAAGATCCAGAGAGTCCTAGCTCATCAATTGATTCCATCACAAACAGGGTTGATCAAATATTGGATGATGTAGATGTTGGTGAATGCGAGATTCCATGGGAGGATCTGGTTCTTGGTGAAAGAATTGGTATAGGTTCATATGGAGAGGTATACCATGCTGACTGGAATGGCACGGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCAGGCGCTGCATTATCAGAATTCAAAAGAGAAGTGCGGATAATGCGTAGGCTACGTCATCCAAATATTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCCAATCTGTCAATCATTTCAGAGTATCTACCAAGAGGAAGCTTGTACCGAATTCTTCATCGCCCTAATTGTCAGATTGATGAGAAACGAAGAATAAAAATGGCTCTGGATGTGGCTAGGGGCATGAATTGCTTACACACCAGCACACCTACAATTGTTCATCGAGATCTAAAGTCTCCAAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTATGTGATTTTGGGTTGTCACGGTTGAAGCACAACACTTTTTTGTCATCCAAGTCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAGCCCTCAAATGAGAAATGCGATGTTTATAGTTTTGGAGTCATCTTATGGGAGCTTGCCACTCTAAGGTTGCCGTGGAGTGGAATGAATCCTATGCAAGTTGTTGGTGCCGTTGGTTTCCAAAACCGCAGACTTGATATTCCTAAGGAAGTCGATCCTATAGTTGCAAGAATAATCTGGGAGTGTTGGCAACAGGATCCAAATTTGCGGCCCTCGTTTGCGCAACTCACAGTGGCTCTAAAGCCTCTACAGCGTCTGGTTATCCCATCTTATCAAGATCAGTTAGCTCCACCTATGCCGCAGGAGATTTCTGTAAATTCCACCCCCTGA 2793 0.4443 MSERVKKEKQTGEKRERMKNIFKKLHIGSSHDPHRSNEASPSVPSPPCVADQSQSSAATPASPSSASASASTVVVTPGGGGGGASPVMNRQDFFSSEEEFQVQLALAISASNSEFREDPEKDQIHAATLLSLGGHRIDSARNKDDVAEALSRQYWEYNVLDYEEKVVDGFYDVYGPYNDSVMQGKMPSRTDLEANPGGSELVIVNRTIDPSLEELIQIAQCIALDCPVSSLVQRLAELVTSHMGGPVKDASIMLARWTETRAELKTSLHTIVLPLGSLNIGLSRHRALLFKVLADNINMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPADILSTKDSAFKPYNPKIWPSLPSTKDNEFSYSRPIQPSHGEGSSQNSVVKDYSLPWNGKPYFEKSEPSNLGLSRDSGVGPSKIPNKGTPNQLENLPALSGTSLYKGTLGMNTVGDGTRLNVNVVPYTNNSPNDSRNLFADLNPFQIKGMGKAPVHNKPVENKPPELKSTKNNAVSGRPPVPLMWKNRHAYNEDPRKTNHNPNEYNPPLFVSNGSSMSEIIDLSSSKPLYNSNINNDVNAQTLAQVTGSVSPPNHDQRNCTYDRFMGSNLKLKDPESPSSSIDSITNRVDQILDDVDVGECEIPWEDLVLGERIGIGSYGEVYHADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEYLPRGSLYRILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPIVARIIWECWQQDPNLRPSFAQLTVALKPLQRLVIPSYQDQLAPPMPQEISVNSTP* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1451 930 ProSitePatterns Protein kinases ATP-binding region signature. 655 677 IPR017441 GO:0005524
Gso10g1451 930 ProSiteProfiles Protein kinase domain profile. 649 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1451 930 MobiDBLite consensus disorder prediction 34 74 - -
Gso10g1451 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 768 780 IPR008271 GO:0004672|GO:0006468
Gso10g1451 930 Pfam Ethylene-responsive protein kinase Le-CTR1 147 340 - -
Gso10g1451 930 Gene3D Phosphorylase Kinase; domain 1 642 726 - -
Gso10g1451 930 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 85 569 - -
Gso10g1451 930 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 580 922 - -
Gso10g1451 930 MobiDBLite consensus disorder prediction 407 439 - -
Gso10g1451 930 SMART serkin_6 649 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1451 930 Gene3D Transferase(Phosphotransferase) domain 1 728 910 - -
Gso10g1451 930 MobiDBLite consensus disorder prediction 1 33 - -
Gso10g1451 930 PANTHER SERINE-THREONINE PROTEIN KINASE 85 569 - -
Gso10g1451 930 PANTHER SERINE-THREONINE PROTEIN KINASE 580 922 - -
Gso10g1451 930 MobiDBLite consensus disorder prediction 1 89 - -
Gso10g1451 930 MobiDBLite consensus disorder prediction 492 524 - -
Gso10g1451 930 PRINTS Tyrosine kinase catalytic domain signature 723 736 IPR001245 GO:0004672|GO:0006468
Gso10g1451 930 PRINTS Tyrosine kinase catalytic domain signature 762 780 IPR001245 GO:0004672|GO:0006468
Gso10g1451 930 PRINTS Tyrosine kinase catalytic domain signature 809 819 IPR001245 GO:0004672|GO:0006468
Gso10g1451 930 PRINTS Tyrosine kinase catalytic domain signature 828 850 IPR001245 GO:0004672|GO:0006468
Gso10g1451 930 PRINTS Tyrosine kinase catalytic domain signature 872 894 IPR001245 GO:0004672|GO:0006468
Gso10g1451 930 SUPERFAMILY Protein kinase-like (PK-like) 639 923 IPR011009 -
Gso10g1451 930 MobiDBLite consensus disorder prediction 370 392 - -
Gso10g1451 930 MobiDBLite consensus disorder prediction 425 439 - -
Gso10g1451 930 CDD STKc_MAP3K-like 655 898 - -
Gso10g1451 930 Pfam Protein tyrosine and serine/threonine kinase 650 899 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1451 Gso-Chr10 40900369 40908407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1451 18 885 MAP Kinase Kinase Kinase AT1G08720 56.432 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gso10g1451 PK_Tyr_Ser-Thr 2.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1451 - - gmx:100817822 1815.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1451 10 40900369 40908407 Gso19g1420 19 43098392 43100610 PCT
Gso10g1451 10 40900369 40908407 Gso3g1428 3 40271930 40274324 PCT