Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1446 ATGGTTTTTGAAATCAGTTCTGTTGTTTCAAAATTGCAAACGTTATCCACCTCAGACCATGCCTCCGTGGTCTCCATGAACTTATTTGTGGCACTTCTTTGTGGTTGTATTGTCCTTGGCCATCTTCTTGAGGAGAATCGATGGATGAACGAGTCTATCACTGCCCTTTTGATTGGTGTTTGCACTGGCGTAGTCATTTTGCTGTTTAGTGGTGGCAAAAGCTCACATATTCTTGTTTTCAGTGAAGATCTTTTCTTTATATATCTTCTACCACCTATAATATTCAATGCCGGGTTTCAGGTGAAAAAGAAGCAGTTTTTTGTTAACTTCATGACCATCATGTTGTTTGGTGCTATTGGTACATTAATATCATGTACCATCATAACTTTGGGTGCCACACAAATTTTTAAGAGGTTGGATGTTGGTCCTCTGGAATTAGGGGATTTCCTAGCAATTGGTGCAATATTTGCTGCAACGGATTCTGTTTGCACATTGCAGGTGCTAAATCAGGATGAGACACCTTTGCTGTACAGTCTTGTATTTGGGGAGGGTGTTGTGAATGATGCTACATCAGTGGTGCTTTTCAATGCAATCCAAAGCTTTGACCTCAACCAAATTGACTCTTCAATTGCTGTACACTTTTTGGGAAATTTCTTGTATCTATTTATCGCAAGCACAATGCTTGGAGTTTTGACAGGTCTACTTAGTGCTTACATTATTAAAAAGCTGTACATTGGCAGGCACTCTACAGATCGTGAGGTTGCTCTTATGATGTTAATGGCATACCTGTCCTACATGCTTGCTGAATTATGTTATCTGAGTGGCATTCTCACTGTATTCTTTTGTGGTATTGTTATGTCTCATTATACCTGGCATAACGTGACCGAGAGTTCAAGAATCACTACCAAGCATTCTTTTGCAACCTTGTCATTTGTTGCTGAGATCTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAATGGAAATTCGTCAGTGATAGCCCTGGAACATCTGTAGCAACTAGTGGAGTATTGTTGGGTCTAATTCTTCTTGGAAGAGCAGCTTTTGTTTTCCCCTTATCCTTCATATCCAACTTGGCTAAAAAATCACCAAATGAGAAAATCAGCTTCAGACAGCAAGTGATCATTTGGTGGGCTGGCCTTATGAGAGGTGCTGTTTCCATCGCACTTGCATATAATCAGTTCACCATGTCGGGGCACACTTCACTGCGAAGCAATGCAATCATGATCACAAGCACCATCACTGTTGTGCTTTTCAGCACAGTGGTGTTTGGTCTGTTGACTAAGCCACTCATAAGGCTTTTACTGCCCCATACTCCACATCATAAAGAATCAAGCATCACGATAATCACAGATCCATCTACTCCAAGTCCAAAATCAGTCACTATCCCACTTCTTGGGAGTGCCCAAGAATCTGAAGTTGATATTGATGGCCATGATATCCATCGTCCAAGCAGTATTCGTGCCTTGCTTACGACTCCAACACACACTGTTCATCGTTTGTGGCGTAAGTTTGATGATGCATTCATGCGTCCTGTTTTTGGTGGCAGGGGTTTTGTTCCTGTAGAACCTGGCTCACCAACTGAACGTAATGGCCATCAATGGCGTTGA 1641 0.415 MVFEISSVVSKLQTLSTSDHASVVSMNLFVALLCGCIVLGHLLEENRWMNESITALLIGVCTGVVILLFSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAIGTLISCTIITLGATQIFKRLDVGPLELGDFLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNQIDSSIAVHFLGNFLYLFIASTMLGVLTGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHSFATLSFVAEIFIFLYVGMDALDIEKWKFVSDSPGTSVATSGVLLGLILLGRAAFVFPLSFISNLAKKSPNEKISFRQQVIIWWAGLMRGAVSIALAYNQFTMSGHTSLRSNAIMITSTITVVLFSTVVFGLLTKPLIRLLLPHTPHHKESSITIITDPSTPSPKSVTIPLLGSAQESEVDIDGHDIHRPSSIRALLTTPTHTVHRLWRKFDDAFMRPVFGGRGFVPVEPGSPTERNGHQWR* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1446 546 PANTHER SODIUM/HYDROGEN EXCHANGER 7 545 IPR018422 GO:0006812|GO:0015299|GO:0016021
Gso10g1446 546 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso10g1446 546 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso10g1446 546 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso10g1446 546 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso10g1446 546 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 545 - -
Gso10g1446 546 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 27 452 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso10g1446 546 Pfam Sodium/hydrogen exchanger family 28 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso10g1446 546 Gene3D - 146 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1446 Gso-Chr10 40840045 40846501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1446 6 544 Antiporters AT3G05030 77.449 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1446 - - gmx:100816746 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2024 19 48813569 48816392 Gso10g1446 10 40840045 40846501 PCT
Gso3g2064 3 46008736 46013334 Gso10g1446 10 40840045 40846501 PCT
Gso10g1446 10 40840045 40846501 Gso19g2024 19 48813569 48816392 PCT
Gso10g1446 10 40840045 40846501 Gso3g2064 3 46008736 46013334 PCT