Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1442 ATGGAGTTCAACAAGGACGAGGCTGTGAGGGCTAGGCAAGTTGCAGAAGCTAGAATGCAAAGAGGTGAATTTGTGGAGGCACTCAAGTTTGCTACCAAGGCCAAAAAATTGTGTGCTGACGTTGTAAACATTACCCATGTTATTACAATTTGTGAGGTTCACAATGCTGCAAAGAAAAAACTCTCTGCCACTGATTTGGACTGGTATGCAATTCTTCAGATTGAAGGGTTGGCTGATGAAGCAGCCATAAAGAAACAGTACAGGAGGCTTGCATTGCTACTTCATCCTGATAAGAACAAGTTTGCTGGTGCAGAAGCTGCTTTCAAGTTGGTTGGGCAAGCTAAAGGGGTCTTGAGTGACCAAGCAAAACGTTCTTTGTTTGACAAGAATTTTGGAGCCTCCGTGAGAGGTGCTGCAGTGAAATCCACTGGTTCCAAGAAGCAAGTTAGACAGAAGACGTTCTGGACATGTTGCCAACATTGTAATGCTAAGTACCAGTACTCCATACCATTTTTAAATGCAACTTTACGCTGTCAACAGTGTTTGAAGACCTTTAAAGCTGGTGCTATTCCTTTTGTTGTCCAGAAAGAATCTCCAGTGCATGGTCCTCCAAAACCAGCCTCAGAAAATACTGGTGGAAATCCCCTTGGTAGAGACCATGCTGGTACGTTTGGGCGGTCAAATCCTGTGCCTATGAAAAAATGTGCTGCTGGAGTTGGTGTTCATTGTGAAGGTGAAAAGAGTAAAGATGGCTGCGTTCCTGCATCCAGAGGCATGGACCCCCAAACCTCTAAAAATGTTGGAAGTAAAAGAGTATGGCAGTCAGCACCAGATTCAGGAGAAAGTTTCAAGGCTGGTAATGGTGATGAGATGAAAGATGCTTATGTTCAAGAAAATGCTGTTGATCCTTCGAGACTTAATGCAGGGAGATCTTCCAGGAAAAAGCAGCATTTTTAA 957 0.4368 MEFNKDEAVRARQVAEARMQRGEFVEALKFATKAKKLCADVVNITHVITICEVHNAAKKKLSATDLDWYAILQIEGLADEAAIKKQYRRLALLLHPDKNKFAGAEAAFKLVGQAKGVLSDQAKRSLFDKNFGASVRGAAVKSTGSKKQVRQKTFWTCCQHCNAKYQYSIPFLNATLRCQQCLKTFKAGAIPFVVQKESPVHGPPKPASENTGGNPLGRDHAGTFGRSNPVPMKKCAAGVGVHCEGEKSKDGCVPASRGMDPQTSKNVGSKRVWQSAPDSGESFKAGNGDEMKDAYVQENAVDPSRLNAGRSSRKKQHF* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1442 318 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gso10g1442 318 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gso10g1442 318 PRINTS DnaJ domain signature 103 123 IPR001623 -
Gso10g1442 318 PRINTS DnaJ domain signature 123 142 IPR001623 -
Gso10g1442 318 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 317 - -
Gso10g1442 318 MobiDBLite consensus disorder prediction 250 318 - -
Gso10g1442 318 MobiDBLite consensus disorder prediction 259 276 - -
Gso10g1442 318 MobiDBLite consensus disorder prediction 198 228 - -
Gso10g1442 318 PANTHER - 1 317 - -
Gso10g1442 318 Pfam DnaJ domain 67 128 IPR001623 -
Gso10g1442 318 SMART dnaj_3 66 123 IPR001623 -
Gso10g1442 318 SUPERFAMILY Chaperone J-domain 63 131 IPR036869 -
Gso10g1442 318 CDD DnaJ 67 120 IPR001623 -
Gso10g1442 318 Gene3D DnaJ domain 52 153 IPR036869 -
Gso10g1442 318 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1442 Gso-Chr10 40807118 40809234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1442 4 191 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.518 2.44e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1442 - - gsj:114370736 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2017 19 48772475 48778039 Gso10g1442 10 40807118 40809234 PCT
Gso3g2057 3 45960175 45964862 Gso10g1442 10 40807118 40809234 PCT
Gso10g1442 10 40807118 40809234 Gso19g2017 19 48772475 48778039 PCT
Gso10g1442 10 40807118 40809234 Gso3g2057 3 45960175 45964862 PCT