Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1440 ATGGCTGGGAGTAACGAGCTTAACCCCAACGATTCTAAGATGGTGGTTCCGCTGAATATGTGGGTTCTGATCTCAAATTTCAAGTTGGCATACAATCTTCTTCGTCGCCCGGACGGTACTTTCAACCGGGACTTAGCAGAGTTCCTTGATCGGAAGGTTCCCGCAAATGCCAACCCTGTGGACAGAGTGTTCTCCTTTGATGTTGTTGTTGACCGTGAAACGAATCTTCTGACTCGAATCTATCGTCCTACTGAGGGAGAAGAACGTTCGGTGAACATTCTTGACCTTGAGAAGCCTGTGAGCTCTGAGGTTGTTCCTGTCATCATATTTTTCCATGGTGGAAGTTTTGCGCATTCTTCAGCCAATAGTGCTATATATGACACCCTTTGTCGTCGCCTAGTGGGTATCTGTAAGGCTGTTGTGGTGTCTGTGAACTATAGGCGTGCACCTGAGAATAGGTATCCCTGTGCATATGATGATGGGTGGACAGCTCTTAAGTGGGTTAGTTCTAGATCTTGGCTCCAGAGTAAGAAGGATAAGAAAGTTCATATCTACTTGGCTGGGGATAGCTCAGGTGGGAACATTGTGCACCATGTTGCCCTCAAGGCCGTGGAGTCGGGAATTGAAGTGTTTGGGAATATTCTGCTCAACCCATTGTTTGGTGGGCAAGAAAGAACCGAGTCTGAGAAGCGCTTAGATGGGAGGTATTTTGTTAGAGTTAAGGATCGAGACTGGTATTGGAGGGCTTTTCTTCCTGAAGGGGAAGATAGAGACCACCATGCATGCAACCCGTTTGGCCCCAAGGGGAAGAGTCTTGAAGGGATCACCTTTCCCAAGAGCCTTGTGGTGGTTGCTGGTTTAGACCTTGTTCAGGACTGGCAATTGGGTTATGCCAAAGGGCTTGAGAAGGCTGGCCAAGAAGTGAAATTGATTTTCCTGGAGCAAGCAACCATTGGGTTTTATTTGCTGCCAAACAATGAGCACTTCTCTCCTGTTATGGATGAGATAAAATATTTTGTCAGCTCTGACTGTTGA 1035 0.4696 MAGSNELNPNDSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDRVFSFDVVVDRETNLLTRIYRPTEGEERSVNILDLEKPVSSEVVPVIIFFHGGSFAHSSANSAIYDTLCRRLVGICKAVVVSVNYRRAPENRYPCAYDDGWTALKWVSSRSWLQSKKDKKVHIYLAGDSSGGNIVHHVALKAVESGIEVFGNILLNPLFGGQERTESEKRLDGRYFVRVKDRDWYWRAFLPEGEDRDHHACNPFGPKGKSLEGITFPKSLVVVAGLDLVQDWQLGYAKGLEKAGQEVKLIFLEQATIGFYLLPNNEHFSPVMDEIKYFVSSDC* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1440 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Gso10g1440 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Gso10g1440 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Gso10g1440 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Gso10g1440 344 PANTHER ARYLACETAMIDE DEACETYLASE 2 340 - -
Gso10g1440 344 SUPERFAMILY alpha/beta-Hydrolases 33 337 IPR029058 -
Gso10g1440 344 PANTHER GIBBERELLIN RECEPTOR GID1C 2 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1440 Gso-Chr10 40790372 40793125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1440 1 344 Carbohydrate Esterase AT3G05120 76.812 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1440 K14493 - gmx:100815161 695.271