Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1435 ATGTCAAACCGTGAGAAACAATTACGAAATTCAAATCATTGGAAGGATCATGACGAAGCCTGTTCATGTGTATGTCCCTCCACAGAGATTCAAAGAAACCTACAAACCGATCAAACAGTGACAAACATATATCAACAAAAAATAACAGCCAATGAAAGAGCCAAAATAAGAAACGGGGACAAGAAGAAAAACCAAGCTAATAAATCGAAGAAGAAGCTTACAATTGCAGAAGCTTTAAATTTTGAATCTCATATGCAGCATGCCAATCCCAATCCCAATCCCAATCCCAATCCCAATACCAATACCAATACCAATGCCAATTCGAGGTCCAAAAGAGCTACCAAGAGACAAGCCTCTCTATTTTCTTGTTATTCTTCTGCCCATGACTTGAGGCATTTGGAATTGGAGAAAGAGAAAGAAGACTCATCATCACCAAGAGAAGTCTTGGAAGCCTTCATGAAAGACTTCGTTGACTCTCATCACGAACAATCACATGAATCTGAAACCACTAGTTCAACCACGAAGACACACTATCACTGGACCAAATTCTTCAAACTTTGGAAGAAAAAGTCTTTTAAGCGCCTAGGTTCCATCCCTCCTCTTAGTGTGCCAAAGCTACCAAAATGGAAAAGCAAAAGCAGCAGAGAAAACCAAGCTCTAAGTAAGCTATACAACTTCAGGTCTTCTTGGGTCACTTTCAGCCTCTCAAAACTCAGACATGCAACCAACAATTTTAGTGCTGAAAATATAATTGGAAGAGGTGGTTTTGCTGAGGTTTACAAAGGCTGTCTCCAAAATGGGCAATTAATAGCTGTGAAGAAATTGACTAAAGGGACCACAGATGAAAAAACCGCAGGCTTTCTATGTGAGCTAGGTGTAATTGCTCATGTTGACCATCCTAATACTGCAAAGCTAGTTGGATGTTGTGTAGAAGGAGAAATGCTTCTTGTCTTTCAACTATCTACACTCGGAAGCTTAGGATCTCTTCTTCATGGTTCAGATAAAAACAAATTAGATTGGAGTAAAAGGTATAAAATTTGTCTTGGAATAGCTGATGGTCTCCTCTATCTGCACGAGTGTTGCCACAGGCGAATCATTCATAGAGATATTAAGGCAGAGAATATTCTGCTCACGGAGAATTTTGAGCCACAGATATGTGATTTTGGACTTGCCAAGTGGTTACCAGAACAATGGACTCACCATAATGTATCAAAATTTGAAGGCACATTTGGCTACTTTGCTCCTGAATATTTCATGCATGGAATAGTAGATGAGAAAACTGATGTTTTTTCATTTGGGGTCCTACTTTTGGAGATCATAACTGGGCGTCCAGCGGTGGATCATATGCAGCAGAGTGTTGTGATATGGGCAAAACCATTGCTTGATAAAAATCATATCAAGGACCTCGTTGATCCTTCTCTTGGCGATGATTATGAACGAGGACAGTTGAGCTGTGTAGTTTTGACTGCATCAATGTGTATTGAGCACTCTCCTATCTTCCGCCCCCGCATGAGTCAGGTTGTAACACTGCTAAGAGGTGAAGACCATGTTCTGAAAGCTAAAAAATCAAGCCAAAGTAGTAGGTCTCTACAAAGAACATACTCAGAAGAGCTACCAGACGCGCAAGAATACAACTCAACAAAACATCTAAGAGATCTCAAGCGATTTGAGCAGTTAACATTGTCTAAATGA 1692 0.4007 MSNREKQLRNSNHWKDHDEACSCVCPSTEIQRNLQTDQTVTNIYQQKITANERAKIRNGDKKKNQANKSKKKLTIAEALNFESHMQHANPNPNPNPNPNTNTNTNANSRSKRATKRQASLFSCYSSAHDLRHLELEKEKEDSSSPREVLEAFMKDFVDSHHEQSHESETTSSTTKTHYHWTKFFKLWKKKSFKRLGSIPPLSVPKLPKWKSKSSRENQALSKLYNFRSSWVTFSLSKLRHATNNFSAENIIGRGGFAEVYKGCLQNGQLIAVKKLTKGTTDEKTAGFLCELGVIAHVDHPNTAKLVGCCVEGEMLLVFQLSTLGSLGSLLHGSDKNKLDWSKRYKICLGIADGLLYLHECCHRRIIHRDIKAENILLTENFEPQICDFGLAKWLPEQWTHHNVSKFEGTFGYFAPEYFMHGIVDEKTDVFSFGVLLLEIITGRPAVDHMQQSVVIWAKPLLDKNHIKDLVDPSLGDDYERGQLSCVVLTASMCIEHSPIFRPRMSQVVTLLRGEDHVLKAKKSSQSSRSLQRTYSEELPDAQEYNSTKHLRDLKRFEQLTLSK* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1435 563 MobiDBLite consensus disorder prediction 98 118 - -
Gso10g1435 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 365 377 IPR008271 GO:0004672|GO:0006468
Gso10g1435 563 ProSiteProfiles Protein kinase domain profile. 245 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1435 563 MobiDBLite consensus disorder prediction 85 118 - -
Gso10g1435 563 ProSitePatterns Protein kinases ATP-binding region signature. 251 274 IPR017441 GO:0005524
Gso10g1435 563 Gene3D Transferase(Phosphotransferase) domain 1 322 537 - -
Gso10g1435 563 SMART serkin_6 245 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1435 563 SUPERFAMILY Protein kinase-like (PK-like) 221 511 IPR011009 -
Gso10g1435 563 Gene3D Phosphorylase Kinase; domain 1 207 319 - -
Gso10g1435 563 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 120 558 - -
Gso10g1435 563 Pfam Protein tyrosine and serine/threonine kinase 248 456 IPR001245 GO:0004672|GO:0006468
Gso10g1435 563 PANTHER OS08G0249100 PROTEIN 120 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1435 Gso-Chr10 40749325 40761034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1435 209 517 Receptor kinase-like Gene Family AT1G53420 43.302 3.80e-74 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gso10g1435 PK_Tyr_Ser-Thr 7.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1435 - - gsj:114370403 1054.28