Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1423 ATGGAAGTTAATACTACTACAACCACTGTACCTTCAGGGCCACCAACTAGGAACCATTCTTACACACAACACCGCTTACATTCAGAAAGACATAGCCATAACCATAGCCATGGCCATTTCCCCTCCAAAACCATTCTCATAATCATCGCATTCGTCACCTTAGTCACGGTCCTATTTATCATTTTCGTGGTCCTATTCTTGATCCGTCGCCAAAAATCCTCCAGCAAGAATGGAACTTGCGAAGAAGACAGCAGAGAGCTTCATGACACAAGCAGCAGGCTCATCACTTCAACAACGTTGAATTCTAGCCCAGATGTGAAAAGTGGGTGTCTTCATGGGGGAAATTTGAGCAGGACCCCAGCACCTAAATTTCGTGGAGTACAAGTGTTCACGTATAGGGAGTTAGAAATTGCCACTGATGGATTCAGCGAAGCAAATGTCATTGGTAGTAATGGAATTATTGGAGGGCATGGTTTGATCTATAGAGGTGTTCTAAGTGATGGCACTTTGGCAGCAATTAAGTTGCTTCGCACTGAGGGTAAGCAAGGGGAACGTGCCTTCAGAATAGAGGTCGATCTCTTAAGTCGCTTGCACTCTCCTCATTTGGTGGAGTTACTTGGCTATTGTGCTGACCAACACCACAGGTTACTGATTTTTGAATACATGCCCAATGGAACACTCCACTACCATCTTCACACTCCCAACGATCAATATCAGCTGTTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCCAGAGCACTGGAGTTCTTGCATGAGCATGCAGTCTCACCTGTGATCCACAGAGACTTTAAGAGTAACAACGTTCTACTGGATCAAAATTTCCGTGCCAAAGTGTCTGATTTTGGATTGGCTAAGATGGGATCAGAGAAGAGGAACGGTCGTGTGTTGGGGACCACTGGATATTTGGCACCAGAGTACGCCACGGGTAAGCTTACTACAAAGTCAGATGTTTACAGCTATGGTGTGGTTCTTCTCGAACTGCTCACGGGACGTGTGCCAGTTGATATCAAGAGGGCCCCAGGAGAACACGTCCTTGTCTCTTGGGCTCTTCCAAGGTTGACAAACAGAGAAAAGGTAATTGAAATGGTTGACCCAGCTCTTCGCGGACAGTACTCTAAGAAGGATTTAATTCAGATAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCGCTCATGACAGATGTTGTACAATCACTGATACCACTTGTTAGGAACCAATCCTCTCTTAGTTCATCCAGCTCCCTACGATTTCAGAAACAAACGCCAAGTCCTACTCATTAG 1326 0.46 MEVNTTTTTVPSGPPTRNHSYTQHRLHSERHSHNHSHGHFPSKTILIIIAFVTLVTVLFIIFVVLFLIRRQKSSSKNGTCEEDSRELHDTSSRLITSTTLNSSPDVKSGCLHGGNLSRTPAPKFRGVQVFTYRELEIATDGFSEANVIGSNGIIGGHGLIYRGVLSDGTLAAIKLLRTEGKQGERAFRIEVDLLSRLHSPHLVELLGYCADQHHRLLIFEYMPNGTLHYHLHTPNDQYQLLDWWARMRIALDCARALEFLHEHAVSPVIHRDFKSNNVLLDQNFRAKVSDFGLAKMGSEKRNGRVLGTTGYLAPEYATGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHVLVSWALPRLTNREKVIEMVDPALRGQYSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLIPLVRNQSSLSSSSSLRFQKQTPSPTH* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1423 441 SUPERFAMILY Protein kinase-like (PK-like) 124 414 IPR011009 -
Gso10g1423 441 MobiDBLite consensus disorder prediction 76 101 - -
Gso10g1423 441 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 1 439 - -
Gso10g1423 441 Gene3D Phosphorylase Kinase; domain 1 115 221 - -
Gso10g1423 441 MobiDBLite consensus disorder prediction 1 36 - -
Gso10g1423 441 Pfam Protein tyrosine and serine/threonine kinase 157 414 IPR001245 GO:0004672|GO:0006468
Gso10g1423 441 MobiDBLite consensus disorder prediction 1 21 - -
Gso10g1423 441 CDD STKc_IRAK 148 417 - -
Gso10g1423 441 PANTHER OS01G0750732 PROTEIN 1 439 - -
Gso10g1423 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Gso10g1423 441 MobiDBLite consensus disorder prediction 76 90 - -
Gso10g1423 441 ProSiteProfiles Protein kinase domain profile. 142 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1423 441 Gene3D Transferase(Phosphotransferase) domain 1 222 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1423 Gso-Chr10 40634034 40637659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1423 110 439 Receptor kinase-like Gene Family AT3G58690 60.234 4.86e-145 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gso10g1423 PK_Tyr_Ser-Thr 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1423 - - gmx:100809810 850.121