Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1405 ATGAACGATCAATCCATGCAAATCCAAATGCTCGCTGAAAAATTCCACCGATTCGTTCTTGACTGCGAACTCAAGCAACCATCAATCGCTCAGTGCTCTGATATTGAGTCAAAGAAAGTGAACGAGAACTCTGACTCCATGGATGAACATAGTTTGTCCAATGGAATCCATGAAGTTTCTCCGGATACGGGCCACACGCTTCCCATATTGAAGAAAATACTTGATCTCAGTGCTAAAGTTCAGGATTTGAAGAAGCAGCATATAACCATGTGCGATGAAGTGAAACTCACTACTCAATCTTTTCCTGGCACTGATATTATGAAGTCTGTGCAGCTTCTCGGTGCTGAATATGAACTCCTAAAAAGAAAGTACTCAGAGGAGTCCTCTGAGCGGAGGCGGCTTTACAATGAAGTAATTGAACTCAAGGGAAATATTAGAGTTTTCTGCAGATGTAGACCATTAAATGAGAATGAAATTGCTAATGGGTCTGCATCTGTTGTCAATTTTGAGTCGTCTTCAGATAATGAGCTTCAAGTCATTTGTGCAGACTCTTCTAAAAAGCAATTTAAATTTGATCATGTATTTGGGCCAGAAGATAACCAAGAGGCTGTTTTTCAACAGACCAAACCCATTGTTACATCAGTATTGGATGGGTACAATGTCTGCATATTTGCCTATGGGCAAACTGGAACTGGGAAAACATTTACAATGGAAGGAACACCAGAACACAGGGGAGTTAACTACAGAACCCTGGAAGAATTATTTCGGATAACTGAAGAGAGACATGATACAATGAAGTATGAATTGTCTGTTAGCATGCTGGAGGTCTACAATGAGAAGATAAGAGATCTCTTGGTGGAAAATTCTGCCGAACCTACTAAGAAATTGGAGATAAAGCAAGCTGCAGAAGGAACCCAAGAGGTCCCAGGACTTGTTGAAGCTCGTGTTTATGGAACAGAAGACGTGTGGGAAATGCTCAAGACTGGAAACCGAGTCAGATCAGTTGGATCCACCTGTGCTAATGAGCTTAGCAGCCGTTCTCACTGCTTGTTAAGAGTAACTGTAATGGGGGAAAATTTAATCAATGGCCAGAGAACAAAGAGCCACCTTTGGCTAGTAGACTTAGCTGGCAGTGAGCGCCTGGGAAAAACTGAAGCCGAAGGAGAAAGGCTGAAGGAATCTCAGTTCATAAATAAGTCACTTTCAGCACTCGGTGATGTTATTTCTGCCCTTGCTTCCAAATCATCCCACATCCCTTACAGGAACTCAAAACTCACTCATATGCTGCAAAGCTCTTTAGGAGGAGACTGCAAAACTTTAATGTTTGTGCAAGTAAGTCCAAGTTCGGCAGACTTGGGAGAGACACTTTGCTCGTTGAATTTTGCCACCCGTGTCCGTGGGATCGAGAGTGGCCCAGCTCGCAAGCAAGTAGACCACACTGAGCTGTTTAAGTACAAGCAAATGGCTGAAAAGCTGAAACAAGATGAGAAGGAAACAAAGAAATTACAGGATAGCTTGCAAATCATGCAACTCAGGCTTGCTGCAAGAGAACATCATTGTAGAACCCTTCAGGAAAAGGTCCGGGAACTTGAGAACCAGATTGCAGAAGAAAGGAAAACCAGACTAAAGCAAGAAAGTAGATCTCTTGCAGCTGTTACAGTTCAACCTTCATCAGCAGCAGCTCATAAAACCATGACAGACAAGAAGCCTCCACTGAATCCTTCAAAACTGAGAATGCCACTGGGAAGAATAACCAATTCATTGCCTCCACGGTCTCCTCTAAGATCAAAGAGTTACACTGCCTTCATGAGTGGAAAGGAAAACTCTGTCAGAAGGAACTCAGTGGTGACGAGTGCTGTAAGGCCAGCTTCATCATCAACAACAGCACAGTTCCTTCAGGCAAGGAGGCGGGTGTCCATTGCTGTGAGACCGCCTGCACCATCAACAACGCAGGTCCTTCATACAAGAAGGAGGGTCTCCATTGCCACACTACCTTCTCAGACAACTTCTGACATTACTACTCCACTCCGTACCTCAGCGTTCCGTGTTACCGGTGGAAGCAGCCAACAATCACGGATAAGAAGCCAAAGGAAAGATCGGTACTCAAGTTTGTTCGCCCCATTGCCAGAGTTGAGAACATCAGTTGAGACAACTCCAATGACTGTAAGGAGGAGCAGCAAGTTTATGATGAGCAGTCCGGTAAGGGCAGATTCCAGGGAGGGATCCGCTAGGCATCCAACTCTTCTTGCACTTCAGCGCAAGCCTGTGGTCTGGAGTCCCCTTAGAGGTTTGAAAAGTAACAGAAAGTCATCACTCTTGCCATATCGCCCAACCCAAATGCAATAG 2346 0.4446 MNDQSMQIQMLAEKFHRFVLDCELKQPSIAQCSDIESKKVNENSDSMDEHSLSNGIHEVSPDTGHTLPILKKILDLSAKVQDLKKQHITMCDEVKLTTQSFPGTDIMKSVQLLGAEYELLKRKYSEESSERRRLYNEVIELKGNIRVFCRCRPLNENEIANGSASVVNFESSSDNELQVICADSSKKQFKFDHVFGPEDNQEAVFQQTKPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRITEERHDTMKYELSVSMLEVYNEKIRDLLVENSAEPTKKLEIKQAAEGTQEVPGLVEARVYGTEDVWEMLKTGNRVRSVGSTCANELSSRSHCLLRVTVMGENLINGQRTKSHLWLVDLAGSERLGKTEAEGERLKESQFINKSLSALGDVISALASKSSHIPYRNSKLTHMLQSSLGGDCKTLMFVQVSPSSADLGETLCSLNFATRVRGIESGPARKQVDHTELFKYKQMAEKLKQDEKETKKLQDSLQIMQLRLAAREHHCRTLQEKVRELENQIAEERKTRLKQESRSLAAVTVQPSSAAAHKTMTDKKPPLNPSKLRMPLGRITNSLPPRSPLRSKSYTAFMSGKENSVRRNSVVTSAVRPASSSTTAQFLQARRRVSIAVRPPAPSTTQVLHTRRRVSIATLPSQTTSDITTPLRTSAFRVTGGSSQQSRIRSQRKDRYSSLFAPLPELRTSVETTPMTVRRSSKFMMSSPVRADSREGSARHPTLLALQRKPVVWSPLRGLKSNRKSSLLPYRPTQMQ* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1405 781 Gene3D Kinesin motor domain 139 511 IPR036961 -
Gso10g1405 781 CDD KISc_C_terminal 142 469 - -
Gso10g1405 781 MobiDBLite consensus disorder prediction 546 562 - -
Gso10g1405 781 ProSitePatterns Kinesin motor domain signature. 368 379 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso10g1405 781 Coils Coil 485 547 - -
Gso10g1405 781 Pfam Kinesin motor domain 150 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g1405 781 PANTHER KINESIN-RELATED 80 772 IPR027640 GO:0003777|GO:0007018
Gso10g1405 781 MobiDBLite consensus disorder prediction 546 595 - -
Gso10g1405 781 SMART kinesin_4 142 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g1405 781 PRINTS Kinesin heavy chain signature 218 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g1405 781 PRINTS Kinesin heavy chain signature 338 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g1405 781 PRINTS Kinesin heavy chain signature 369 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g1405 781 PRINTS Kinesin heavy chain signature 418 439 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g1405 781 PANTHER KINESIN-LIKE PROTEIN KIN-14S 80 772 - -
Gso10g1405 781 ProSiteProfiles Kinesin motor domain profile. 144 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g1405 781 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 504 IPR027417 -
Gso10g1405 781 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1405 Gso-Chr10 40514476 40518747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1405 107 512 Calmodulin-binding Proteins AT5G65930 41.133 1.02e-81 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1405 K10406 - gmx:100817813 1499.18