Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso10g1401 | ATGACGTGTACGGTAGATGATTGGATAATACAAATCCGTATTCTCCCTCCTCGAACGCGTTCGTGGCACTGCAAAAAATCTCATTTGCCCAGTGCCCTCGTTATATTCAAGTTTCGCGGCAATGAGGTGATTTTCACCCCTCTCCGTGTAAACCCTGCCACTCCTTTTTTCCTCTTCTTCTCGTGCTTCAGTGGAAATCGGCGTAACTCCACGACCGTTCAAAGACATAAGAGCTCAATGGCACCAACAAGGAAATCTAGAAGTGTAAATAAGCGGATGTCAAGTTCAAATGACAATTCCCCTGAGAAAGATGGAGTTAATTCAAATAAAAGCAAGCAACGGAAGAGAAAGTTGACTGATAAATTGGGATCTCAGTGGAGCAAGGAGGAACTTGAGCGATTTTATGAAGCATATAGGAAGTATGGGAAAGATTGGAAGAAGGTGGCTGCTGTTGTACGCAATAGATCCACTGAAATGGTTGAAGCTCTTTACAATATGAATCGGGCATACCTCTCTCTGCCAGAGGGGACGGCTTCTGTTGTTGGCCTTATAGCGATGATGACGGATCATTACAATGTGATGGAAGGGAGTGATAGTGAAAGGGAGAGCAATGATGCACCAGGATCTCGAAAACCTGTAAAACGAAAGCGTGAAAAAGTTCAGCTTAGTATCTCTAAAGATCAGTCTCATTCAATTGCTTCTAGTGATGATTGCCTCTCTATATTGAAGAAGAGACGCTTTGATGGTATCCAGCTCAAGCCTCATGCGGTTGGTAAAAGGACTCCTCGCGTCCCGGTTTATAAGAAAGATGATACAGAAAATTATGTTTCACCTTATAGAAGAAGCCTGAAGTCGACTATTGATGCTAATGATGATGAAGTTGCACATGTTGTAGCTTTGGCATTAACTGAGGCTGCACAAAGGGGAGGCTCTCCCCAAGTTTCTCAAACACCATCTAGAAGAGTAGAGCAAAAATCCTCTCCCATTCAGAGCTGGGAAAGAAAGCACCAAATGTCAAAGACAGCTCGTGCAAAGTTTCCTGATGTTTCTGTGGATAAAGAGGTTTTAGAAGGTAGTATAGAAAGCAGGGGAGCTGAAAATGAAGAATATGCAAAAGATAATAGTTCATTGATGGATACAGAAGGAATAGACACTGCTGAAGTTTTTCAGAAAGAGGGACAATTTTATAGAAAGAGAGAGAGAGTGAAAAATGTGGGAAATCATCAACTTGATGATGGTGGGGAAGCATGTAGCGGCACTGAAGAAGGACTTAGTTTTAATTCACTAAAGGAAAAGGTTGATATTGAGGTTACTAATGAAAAACTTGAAAAATTCTCTCCAAAAAGTCACAGGAAAAGAAACAAGAAACTCTTCTTTGGAGATGAAACCCCTGCCTTGAATGCGTTGCAAACTTTGGCTGATCTGTCTCTAATGATGCCAATATCTACTATGGAATCTGAATCATCTATCCAGTTGAAGGGCGAAAGAATGGTTGCTGATAAGAATAATAGGTCTGCTTTACCCGAAGCAACATCAACAAGCCATAAGAGACATAAACTTAAATACAGTGTGGTACCTAAAATTGAGGTTTCGACCTCCAAAGAGTCTAAGATTGGAAAGGAACCGACAAAGGATACTAATGCTCTCTCTGAATCGAAAGAAAAACTTCCATTTGCTGATACAGCATGGAAAAGAAAGCGGAAGTCTATGGGTTCAAAGGTTGCAAGTGCAAAGCTTGATTCATATCCAAGTGGTCCCTTGAAAGATGAGGCCTTAGATGATGGTAACAAACCGGTGGTTAAAGGAAAACACACGGATCAGGCTTTTACCCTACCAAAGCAATTGAAGACAGTTAAGTCGTCAGAGAGTTCCTTGTGTAGTGATCAGAAAGATTTAACAGTATCAACGGCAGAAATTCCACTTTTGAATGAAGTTAGTTTACCAACTAAACAAAGAAAACGAAAGATGATTTTACAGAGAACTTCCTTGCCTAAGGAAAAGTCTTCTGATTACATATTGAAAAGTCAATCTAACAAGTACTCCACCCTAAAGGAAAAGCTTTCTAGTTGCTTGTCATCTAATATGGTTCGCAGATGGTTTGTTTTTGAATGGTTTTATAGTGCAATTGATTATCCATGGTTTGCCAAAAGGGAATTCATGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGGTTAACTCGTGTCGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAAACCCCGCAGGTTTTCTGAACACTTTCTATGTGAAGAAAGGCAAAAACTTGAACAGTATCGGGAATCAGTGAGGAAACATTACACTGAACTGCGGACTGGTATTAGGGATGGACTTCCAACAGATTTAGCCAAACCATTATATGTTGGACAACATGTAATTGCTCTTCATCCAAAAACAAGAGAGATTCATGATGGTAGTGTGCTTACCGTTGACTATGACAAGTGCAGGATTCAGTTTGACCGTCCTGAATTAGGTGTTGAATTTGTAATGGACATTGATTGCATGCCTTTGAATTCATCAGATAATATGCCAGAAGCTCTGAGGAGGCATATTGGTTCCCCAATATCCTCTTTCATGAATAAAGAGCCACAAATTAGTGGAAATTCAAATTTTGGGGGGTGCGAAATGAATCATTCCTCACCCGTGAAGGCAAAGGTTGCTACCGTTGATAATCTCTGTGCACAAGCAGGTTGTGCTCAACCATGTAAAGTAACACACCATCAAGCTAAGGAAGCTGACATACAGGCAGTTTCTGAACTAAAGCATGCTCTAGATAAAAAGGAGACATTGTTGATGGAGCTTCGAAGTGCAAATAGCGACATATTGGAAAACAAAAATGGCATAGACTGCTTAAAAGATTCTGAGGTTTTCAAGAAGCATTATGCGACGGTACTGTTACAGCTAAAGGAAGCCAGTGGACAGGTTTCTGATGCTATGCTACAACTGAGGCAACGCAATACTTACAGAGGAAACTCTCTGCCATCCTGGATGAAGCCACAAGCAAGTTTCAATGTTCATGATGATCTTCCCAGTATGTTGGATAGTTCTCTGACACAAGAGTTAGGGTCAACTGTTGTTCAAGTTATTAAAGGATCCAGGCTAAGGGCACATGCAATGGTAGATGCTGCATTTCAGGCATTGTCTTTGGCAAAGGAAGGTGAAGATGCTTTCATAAAGATTGGGCAAGCATTGGATTCTATAAATCATCAGCAGTTAGCCTCCCAGTCTAGGTTACCCGTGATCAGGTCTCAAGAGCAAGTGAACGCGAATGGCAGTTTTTATCATCTTAATCATTCAACTAGCGGTGTATCAGAACCTATACTTAATGATCCATCGCTTCCAAAACCACATAATTGTTCTGACAAATTTGATACTGAACTTCCATCAGATCTTATCACATCGTGTGTTGCTACATTAATCATGATTCAGACTTGTACTGAACGGCAATACCCTCCAGCTGATGTGGCTCAGATATTAGATTCTGCCGTTACCAGTCTGCATCCATGCTGTTCTCAAAACCTTCCTATTTATAGAGAAATTCAAATGTGCATGGGAAGAATCAAAACGCAGATGTTAGCTCTCATCCCTACTTGA | 3618 | 0.408 | MTCTVDDWIIQIRILPPRTRSWHCKKSHLPSALVIFKFRGNEVIFTPLRVNPATPFFLFFSCFSGNRRNSTTVQRHKSSMAPTRKSRSVNKRMSSSNDNSPEKDGVNSNKSKQRKRKLTDKLGSQWSKEELERFYEAYRKYGKDWKKVAAVVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSERESNDAPGSRKPVKRKREKVQLSISKDQSHSIASSDDCLSILKKRRFDGIQLKPHAVGKRTPRVPVYKKDDTENYVSPYRRSLKSTIDANDDEVAHVVALALTEAAQRGGSPQVSQTPSRRVEQKSSPIQSWERKHQMSKTARAKFPDVSVDKEVLEGSIESRGAENEEYAKDNSSLMDTEGIDTAEVFQKEGQFYRKRERVKNVGNHQLDDGGEACSGTEEGLSFNSLKEKVDIEVTNEKLEKFSPKSHRKRNKKLFFGDETPALNALQTLADLSLMMPISTMESESSIQLKGERMVADKNNRSALPEATSTSHKRHKLKYSVVPKIEVSTSKESKIGKEPTKDTNALSESKEKLPFADTAWKRKRKSMGSKVASAKLDSYPSGPLKDEALDDGNKPVVKGKHTDQAFTLPKQLKTVKSSESSLCSDQKDLTVSTAEIPLLNEVSLPTKQRKRKMILQRTSLPKEKSSDYILKSQSNKYSTLKEKLSSCLSSNMVRRWFVFEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLCEERQKLEQYRESVRKHYTELRTGIRDGLPTDLAKPLYVGQHVIALHPKTREIHDGSVLTVDYDKCRIQFDRPELGVEFVMDIDCMPLNSSDNMPEALRRHIGSPISSFMNKEPQISGNSNFGGCEMNHSSPVKAKVATVDNLCAQAGCAQPCKVTHHQAKEADIQAVSELKHALDKKETLLMELRSANSDILENKNGIDCLKDSEVFKKHYATVLLQLKEASGQVSDAMLQLRQRNTYRGNSLPSWMKPQASFNVHDDLPSMLDSSLTQELGSTVVQVIKGSRLRAHAMVDAAFQALSLAKEGEDAFIKIGQALDSINHQQLASQSRLPVIRSQEQVNANGSFYHLNHSTSGVSEPILNDPSLPKPHNCSDKFDTELPSDLITSCVATLIMIQTCTERQYPPADVAQILDSAVTSLHPCCSQNLPIYREIQMCMGRIKTQMLALIPT* | 1206 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso10g1401 | 1205 | MobiDBLite | consensus disorder prediction | 71 | 121 | - | - | |
Gso10g1401 | 1205 | Gene3D | - | 59 | 178 | - | - | |
Gso10g1401 | 1205 | MobiDBLite | consensus disorder prediction | 533 | 605 | - | - | |
Gso10g1401 | 1205 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 120 | 160 | IPR017930 | - | |
Gso10g1401 | 1205 | MobiDBLite | consensus disorder prediction | 306 | 344 | - | - | |
Gso10g1401 | 1205 | MobiDBLite | consensus disorder prediction | 308 | 335 | - | - | |
Gso10g1401 | 1205 | MobiDBLite | consensus disorder prediction | 195 | 224 | - | - | |
Gso10g1401 | 1205 | PANTHER | LIN-9 | 80 | 1205 | IPR010561 | GO:0006351|GO:0017053 | |
Gso10g1401 | 1205 | SMART | DIRP_2 | 705 | 806 | IPR033471 | - | |
Gso10g1401 | 1205 | ProSiteProfiles | Myb-like domain profile. | 124 | 165 | IPR001005 | - | |
Gso10g1401 | 1205 | MobiDBLite | consensus disorder prediction | 71 | 104 | - | - | |
Gso10g1401 | 1205 | PANTHER | PROTEIN ALWAYS EARLY 1-RELATED | 80 | 1205 | IPR028306 | - | |
Gso10g1401 | 1205 | MobiDBLite | consensus disorder prediction | 195 | 228 | - | - | |
Gso10g1401 | 1205 | MobiDBLite | consensus disorder prediction | 533 | 567 | - | - | |
Gso10g1401 | 1205 | Pfam | DIRP | 704 | 805 | IPR033471 | - | |
Gso10g1401 | 1205 | Pfam | Myb-like DNA-binding domain | 124 | 161 | IPR001005 | - | |
Gso10g1401 | 1205 | SUPERFAMILY | Homeodomain-like | 120 | 169 | IPR009057 | - | |
Gso10g1401 | 1205 | Coils | Coil | 925 | 945 | - | - | |
Gso10g1401 | 1205 | CDD | SANT | 126 | 167 | IPR001005 | - | |
Gso10g1401 | 1205 | MobiDBLite | consensus disorder prediction | 105 | 121 | - | - | |
Gso10g1401 | 1205 | ProSiteProfiles | SANT domain profile. | 121 | 158 | IPR017884 | - | |
Gso10g1401 | 1205 | SMART | sant | 122 | 170 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso10g1401 | Gso-Chr10 | 40465265 | 40480444 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Gso10g1401 | DIRP | 1.7e-31 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso10g1401 | - | - | gmx:100816217 | 2378.21 |