Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1401 ATGACGTGTACGGTAGATGATTGGATAATACAAATCCGTATTCTCCCTCCTCGAACGCGTTCGTGGCACTGCAAAAAATCTCATTTGCCCAGTGCCCTCGTTATATTCAAGTTTCGCGGCAATGAGGTGATTTTCACCCCTCTCCGTGTAAACCCTGCCACTCCTTTTTTCCTCTTCTTCTCGTGCTTCAGTGGAAATCGGCGTAACTCCACGACCGTTCAAAGACATAAGAGCTCAATGGCACCAACAAGGAAATCTAGAAGTGTAAATAAGCGGATGTCAAGTTCAAATGACAATTCCCCTGAGAAAGATGGAGTTAATTCAAATAAAAGCAAGCAACGGAAGAGAAAGTTGACTGATAAATTGGGATCTCAGTGGAGCAAGGAGGAACTTGAGCGATTTTATGAAGCATATAGGAAGTATGGGAAAGATTGGAAGAAGGTGGCTGCTGTTGTACGCAATAGATCCACTGAAATGGTTGAAGCTCTTTACAATATGAATCGGGCATACCTCTCTCTGCCAGAGGGGACGGCTTCTGTTGTTGGCCTTATAGCGATGATGACGGATCATTACAATGTGATGGAAGGGAGTGATAGTGAAAGGGAGAGCAATGATGCACCAGGATCTCGAAAACCTGTAAAACGAAAGCGTGAAAAAGTTCAGCTTAGTATCTCTAAAGATCAGTCTCATTCAATTGCTTCTAGTGATGATTGCCTCTCTATATTGAAGAAGAGACGCTTTGATGGTATCCAGCTCAAGCCTCATGCGGTTGGTAAAAGGACTCCTCGCGTCCCGGTTTATAAGAAAGATGATACAGAAAATTATGTTTCACCTTATAGAAGAAGCCTGAAGTCGACTATTGATGCTAATGATGATGAAGTTGCACATGTTGTAGCTTTGGCATTAACTGAGGCTGCACAAAGGGGAGGCTCTCCCCAAGTTTCTCAAACACCATCTAGAAGAGTAGAGCAAAAATCCTCTCCCATTCAGAGCTGGGAAAGAAAGCACCAAATGTCAAAGACAGCTCGTGCAAAGTTTCCTGATGTTTCTGTGGATAAAGAGGTTTTAGAAGGTAGTATAGAAAGCAGGGGAGCTGAAAATGAAGAATATGCAAAAGATAATAGTTCATTGATGGATACAGAAGGAATAGACACTGCTGAAGTTTTTCAGAAAGAGGGACAATTTTATAGAAAGAGAGAGAGAGTGAAAAATGTGGGAAATCATCAACTTGATGATGGTGGGGAAGCATGTAGCGGCACTGAAGAAGGACTTAGTTTTAATTCACTAAAGGAAAAGGTTGATATTGAGGTTACTAATGAAAAACTTGAAAAATTCTCTCCAAAAAGTCACAGGAAAAGAAACAAGAAACTCTTCTTTGGAGATGAAACCCCTGCCTTGAATGCGTTGCAAACTTTGGCTGATCTGTCTCTAATGATGCCAATATCTACTATGGAATCTGAATCATCTATCCAGTTGAAGGGCGAAAGAATGGTTGCTGATAAGAATAATAGGTCTGCTTTACCCGAAGCAACATCAACAAGCCATAAGAGACATAAACTTAAATACAGTGTGGTACCTAAAATTGAGGTTTCGACCTCCAAAGAGTCTAAGATTGGAAAGGAACCGACAAAGGATACTAATGCTCTCTCTGAATCGAAAGAAAAACTTCCATTTGCTGATACAGCATGGAAAAGAAAGCGGAAGTCTATGGGTTCAAAGGTTGCAAGTGCAAAGCTTGATTCATATCCAAGTGGTCCCTTGAAAGATGAGGCCTTAGATGATGGTAACAAACCGGTGGTTAAAGGAAAACACACGGATCAGGCTTTTACCCTACCAAAGCAATTGAAGACAGTTAAGTCGTCAGAGAGTTCCTTGTGTAGTGATCAGAAAGATTTAACAGTATCAACGGCAGAAATTCCACTTTTGAATGAAGTTAGTTTACCAACTAAACAAAGAAAACGAAAGATGATTTTACAGAGAACTTCCTTGCCTAAGGAAAAGTCTTCTGATTACATATTGAAAAGTCAATCTAACAAGTACTCCACCCTAAAGGAAAAGCTTTCTAGTTGCTTGTCATCTAATATGGTTCGCAGATGGTTTGTTTTTGAATGGTTTTATAGTGCAATTGATTATCCATGGTTTGCCAAAAGGGAATTCATGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGGTTAACTCGTGTCGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAAACCCCGCAGGTTTTCTGAACACTTTCTATGTGAAGAAAGGCAAAAACTTGAACAGTATCGGGAATCAGTGAGGAAACATTACACTGAACTGCGGACTGGTATTAGGGATGGACTTCCAACAGATTTAGCCAAACCATTATATGTTGGACAACATGTAATTGCTCTTCATCCAAAAACAAGAGAGATTCATGATGGTAGTGTGCTTACCGTTGACTATGACAAGTGCAGGATTCAGTTTGACCGTCCTGAATTAGGTGTTGAATTTGTAATGGACATTGATTGCATGCCTTTGAATTCATCAGATAATATGCCAGAAGCTCTGAGGAGGCATATTGGTTCCCCAATATCCTCTTTCATGAATAAAGAGCCACAAATTAGTGGAAATTCAAATTTTGGGGGGTGCGAAATGAATCATTCCTCACCCGTGAAGGCAAAGGTTGCTACCGTTGATAATCTCTGTGCACAAGCAGGTTGTGCTCAACCATGTAAAGTAACACACCATCAAGCTAAGGAAGCTGACATACAGGCAGTTTCTGAACTAAAGCATGCTCTAGATAAAAAGGAGACATTGTTGATGGAGCTTCGAAGTGCAAATAGCGACATATTGGAAAACAAAAATGGCATAGACTGCTTAAAAGATTCTGAGGTTTTCAAGAAGCATTATGCGACGGTACTGTTACAGCTAAAGGAAGCCAGTGGACAGGTTTCTGATGCTATGCTACAACTGAGGCAACGCAATACTTACAGAGGAAACTCTCTGCCATCCTGGATGAAGCCACAAGCAAGTTTCAATGTTCATGATGATCTTCCCAGTATGTTGGATAGTTCTCTGACACAAGAGTTAGGGTCAACTGTTGTTCAAGTTATTAAAGGATCCAGGCTAAGGGCACATGCAATGGTAGATGCTGCATTTCAGGCATTGTCTTTGGCAAAGGAAGGTGAAGATGCTTTCATAAAGATTGGGCAAGCATTGGATTCTATAAATCATCAGCAGTTAGCCTCCCAGTCTAGGTTACCCGTGATCAGGTCTCAAGAGCAAGTGAACGCGAATGGCAGTTTTTATCATCTTAATCATTCAACTAGCGGTGTATCAGAACCTATACTTAATGATCCATCGCTTCCAAAACCACATAATTGTTCTGACAAATTTGATACTGAACTTCCATCAGATCTTATCACATCGTGTGTTGCTACATTAATCATGATTCAGACTTGTACTGAACGGCAATACCCTCCAGCTGATGTGGCTCAGATATTAGATTCTGCCGTTACCAGTCTGCATCCATGCTGTTCTCAAAACCTTCCTATTTATAGAGAAATTCAAATGTGCATGGGAAGAATCAAAACGCAGATGTTAGCTCTCATCCCTACTTGA 3618 0.408 MTCTVDDWIIQIRILPPRTRSWHCKKSHLPSALVIFKFRGNEVIFTPLRVNPATPFFLFFSCFSGNRRNSTTVQRHKSSMAPTRKSRSVNKRMSSSNDNSPEKDGVNSNKSKQRKRKLTDKLGSQWSKEELERFYEAYRKYGKDWKKVAAVVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSERESNDAPGSRKPVKRKREKVQLSISKDQSHSIASSDDCLSILKKRRFDGIQLKPHAVGKRTPRVPVYKKDDTENYVSPYRRSLKSTIDANDDEVAHVVALALTEAAQRGGSPQVSQTPSRRVEQKSSPIQSWERKHQMSKTARAKFPDVSVDKEVLEGSIESRGAENEEYAKDNSSLMDTEGIDTAEVFQKEGQFYRKRERVKNVGNHQLDDGGEACSGTEEGLSFNSLKEKVDIEVTNEKLEKFSPKSHRKRNKKLFFGDETPALNALQTLADLSLMMPISTMESESSIQLKGERMVADKNNRSALPEATSTSHKRHKLKYSVVPKIEVSTSKESKIGKEPTKDTNALSESKEKLPFADTAWKRKRKSMGSKVASAKLDSYPSGPLKDEALDDGNKPVVKGKHTDQAFTLPKQLKTVKSSESSLCSDQKDLTVSTAEIPLLNEVSLPTKQRKRKMILQRTSLPKEKSSDYILKSQSNKYSTLKEKLSSCLSSNMVRRWFVFEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLCEERQKLEQYRESVRKHYTELRTGIRDGLPTDLAKPLYVGQHVIALHPKTREIHDGSVLTVDYDKCRIQFDRPELGVEFVMDIDCMPLNSSDNMPEALRRHIGSPISSFMNKEPQISGNSNFGGCEMNHSSPVKAKVATVDNLCAQAGCAQPCKVTHHQAKEADIQAVSELKHALDKKETLLMELRSANSDILENKNGIDCLKDSEVFKKHYATVLLQLKEASGQVSDAMLQLRQRNTYRGNSLPSWMKPQASFNVHDDLPSMLDSSLTQELGSTVVQVIKGSRLRAHAMVDAAFQALSLAKEGEDAFIKIGQALDSINHQQLASQSRLPVIRSQEQVNANGSFYHLNHSTSGVSEPILNDPSLPKPHNCSDKFDTELPSDLITSCVATLIMIQTCTERQYPPADVAQILDSAVTSLHPCCSQNLPIYREIQMCMGRIKTQMLALIPT* 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1401 1205 MobiDBLite consensus disorder prediction 71 121 - -
Gso10g1401 1205 Gene3D - 59 178 - -
Gso10g1401 1205 MobiDBLite consensus disorder prediction 533 605 - -
Gso10g1401 1205 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 120 160 IPR017930 -
Gso10g1401 1205 MobiDBLite consensus disorder prediction 306 344 - -
Gso10g1401 1205 MobiDBLite consensus disorder prediction 308 335 - -
Gso10g1401 1205 MobiDBLite consensus disorder prediction 195 224 - -
Gso10g1401 1205 PANTHER LIN-9 80 1205 IPR010561 GO:0006351|GO:0017053
Gso10g1401 1205 SMART DIRP_2 705 806 IPR033471 -
Gso10g1401 1205 ProSiteProfiles Myb-like domain profile. 124 165 IPR001005 -
Gso10g1401 1205 MobiDBLite consensus disorder prediction 71 104 - -
Gso10g1401 1205 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 80 1205 IPR028306 -
Gso10g1401 1205 MobiDBLite consensus disorder prediction 195 228 - -
Gso10g1401 1205 MobiDBLite consensus disorder prediction 533 567 - -
Gso10g1401 1205 Pfam DIRP 704 805 IPR033471 -
Gso10g1401 1205 Pfam Myb-like DNA-binding domain 124 161 IPR001005 -
Gso10g1401 1205 SUPERFAMILY Homeodomain-like 120 169 IPR009057 -
Gso10g1401 1205 Coils Coil 925 945 - -
Gso10g1401 1205 CDD SANT 126 167 IPR001005 -
Gso10g1401 1205 MobiDBLite consensus disorder prediction 105 121 - -
Gso10g1401 1205 ProSiteProfiles SANT domain profile. 121 158 IPR017884 -
Gso10g1401 1205 SMART sant 122 170 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1401 Gso-Chr10 40465265 40480444 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso10g1401 DIRP 1.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1401 - - gmx:100816217 2378.21