Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1379 ATGGGGATCGATCTCAAGGCCGGAGGTAAAAGCAAAAAAACCAAAAGAACAGCACCCAAGTCCAATGATATCTATCTTAAGCTCTTGGTCAAGCTTTATCGCTTCCTTGTTCGGAGAACTGGCAGCAAATTCAATGCCGTTATACTCAAGAGATTGTTCATGAGCAAGGTTAACAAGCCCCCATTGTCTTTGTCAAGGTTGATTAAGTATACCAAGGGGAAGGAAGATAAGATTGCTGTGGTGGTGGGCAATATAACCGATGATATTCGTGTTTATGAAGTTCCAGCCTTAAAGGTCACAGCACTCAGGTTTACAGAGACTGCTCGGGCAAGAATTGAGAAGGCAGGTGGTGAATGCTTGACGTTTGATCAGTTGGCTCTCAGGGCTCCTCTGGGACAGAACACGGTCCTTCTTAGAGGCCCAAAGAATGCTCGTGAAGCTGTGAAGCACTTTGGTCCTGCTCCTGGTGTGCCTCACAGCCACACCAAGCCTTATGTTCGAGCAAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAGGAGGAACAGCAGAGGATTTAGGGTTTGA 564 0.4699 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLIKYTKGKEDKIAVVVGNITDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRRNSRGFRV* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1379 187 Gene3D - 1 187 - -
Gso10g1379 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
Gso10g1379 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Gso10g1379 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Gso10g1379 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1379 Gso-Chr10 40201341 40203369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1379 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.032 2.31e-104 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1379 K02883 - gmx:100500164 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1956 19 48232011 48233852 Gso10g1379 10 40201341 40203369 PCT
Gso3g1993 3 45407984 45410134 Gso10g1379 10 40201341 40203369 PCT