Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1373 ATGGGGCATTTTTCATCTGCGTTCAATAGGTTGGCAAAGTCTTTTGCAACGAAGAAAGGGAGGAGTTCTGATGAATGTAATGGAAGAGAAGCGGCGGTAGCAATGGCAAAGGAAGCCAAAAGAAATCACTTCATGTTGCATAGCTCCGGCACAGTTAATGTTGATGGTTCTAACAACTTTGCCTCAGTTTTCTCCAAAAAAGGCCAGAAAGGAGTCAATCAGGATTGCTGCATAGTGTGGGAAGAATTTGGATGCCAAGAGGACATGATCTTCTGCGGGATTTTTGATGGGCATGGGCCATGGGGTCACTTTGTGGCCAAAAGAGTACGAAAATCAATGCCAACATCTTTGCTATGCAACTGGCAGGAGACACTTTCCCAATCTCCACTTGATTCAGATGTTGATTTTGATGTAGAGACAGAGAAAAAACAACACCGGTTTAACATGTGGAAGCATTCATACTTGAAGACTTGTGCTGCCATTGATCGCGAACTAGAGCAGAATCGCAAGATAGATTCATTTTACAGTGGAACAACTGCCTTGTCAATTGTTAGACAGGGTGAACTCATTATCATTGCAAACGTTGGTGACTCTCGTGCTGTGTTAGCTACAACATCAGATGATGGAAGTTTGGTACCAGTTCAGCTGACAGTAGATTTCAAGCCCAATTTACCTCAGGAAGCAGAGAGAATACTTGAGTCCAATGGACGAGTTTTCTGCTTAGACGACGAGCCCGGGGTGCACAGGGTGTGGTTGCCGGATGAGGAGTTTCCAGGACTTGCCATGTCAAGGGCTTTTGGTGACTACTGCGTCAAAAAGTATGGTCTTATTTCAGTGCCTGAGGTAACACAAAGGAACATAACCAGCAAAGACCAGTTTGTTGTGCTTGCCACTGATGGGGTGTGGGATGTAATCTCCAATCAAGAAGCGGTGGATATTGTATCTTCAACACCAGACAGAACCGACTCGTCCAAACGTTTGGTGGAGTGTGCAATGCGTGCATGGAAACGCAAGAGGAGGGGCATTGCAATGGATGATATTTCAGCTATTTGTCTCTTCTTTCACTCTTCACCTTCACTTGACCAAGTTGCCACCCTAGAAGAATAG 1107 0.4499 MGHFSSAFNRLAKSFATKKGRSSDECNGREAAVAMAKEAKRNHFMLHSSGTVNVDGSNNFASVFSKKGQKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRKSMPTSLLCNWQETLSQSPLDSDVDFDVETEKKQHRFNMWKHSYLKTCAAIDRELEQNRKIDSFYSGTTALSIVRQGELIIIANVGDSRAVLATTSDDGSLVPVQLTVDFKPNLPQEAERILESNGRVFCLDDEPGVHRVWLPDEEFPGLAMSRAFGDYCVKKYGLISVPEVTQRNITSKDQFVVLATDGVWDVISNQEAVDIVSSTPDRTDSSKRLVECAMRAWKRKRRGIAMDDISAICLFFHSSPSLDQVATLEE* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1373 368 ProSiteProfiles PPM-type phosphatase domain profile. 60 354 IPR001932 -
Gso10g1373 368 Pfam Protein phosphatase 2C 77 328 IPR001932 -
Gso10g1373 368 CDD PP2Cc 59 354 IPR001932 -
Gso10g1373 368 SUPERFAMILY PP2C-like 58 356 IPR036457 -
Gso10g1373 368 Gene3D - 51 356 IPR036457 -
Gso10g1373 368 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 363 - -
Gso10g1373 368 SMART PP2C_4 51 352 IPR001932 -
Gso10g1373 368 PANTHER ALPHABET, ISOFORM E-RELATED 1 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1373 Gso-Chr10 40145513 40148944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1373 1 355 PP2C-type Phosphatase Gene Family AT3G05640 70.588 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1373 - - gmx:100794039 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1943 19 48129666 48133030 Gso10g1373 10 40145513 40148944 PCT
Gso3g1983 3 45337650 45341073 Gso10g1373 10 40145513 40148944 PCT
Gso10g1373 10 40145513 40148944 Gso19g1943 19 48129666 48133030 PCT
Gso10g1373 10 40145513 40148944 Gso3g1983 3 45337650 45341073 PCT