Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1368 ATGAGCAGAACTGAATTATCTAATATGAAGCAACCTCCTGTTCCCCTGGCAACCCTGATTGGCCAGGAGTTACGGAATGGAAAAATCGAAAAGCCTTTTGTGAAGTATGGGCAGGCTGGCCTGGCAAAGAAAGGAGAAGATTACTTTTTAATCAAAGCAGATTGCCAGAGAGTTCCAGGGGATTCATCAACACTGTTTTCTGTCTTTGCGATCTTTGATGGGCACAATGGTATATCTGCTGCTATTTTTGCGAAGGAAAGCATACTAAGTAATGTTTTGAGTGCAATACCACAAGATATCAGTAGGGATGAGTGGCTTCAAGCTCTGCCTCGTGCTCTAGTTGTTGGTTTTGTAAAAACTGACATAGAGTTTCAGAAAAAAGGGGAAACTTCAGGAACAACAGCTACATTTGTTCTGGTTGATGGATGGACTGTTACTGTTGCATCTGTTGGGGATTCCCGTTGCATATTAGATACTCAAGGAGGTGTTGTTTCTCTCTTGACAGTTGATCACAGATTGGAAGAAAATGCAGAAGAGAGGGAACGCGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATGTATTTGGAGGCAATGAGGTAGGGCCTCTTCGCTGTTGGCCTGGTGGATTGTGCCTTTCTAGATCAATTGGTGACACAGACGTGGGAGAATTTATTGTCCCAATACCACATGTCAAGCAAGTGAAGCTATCAAATGCTGGTGGAAGACTTATTATAGCTTCTGATGGTATTTGGGATGCTTTATCTTCTGATATGGCTGCCAAGTCATGCCGGGGTGTACCTGCAGAGCTTGCTGCAAAGCTGGTGGTTAAGGAAGCTCTAAGGTCAAGAGGGCTGAAGGATGATACAACTTGCCTTGTTGTAGATATTATTCCTTCAGATCATCCTATGTTACCAGCAATTCCAAGAAAGAAACGTAGTGTGCTAACTTCCCTTCTCTTTGGAAAGAAATCTCCAAACTCTACAAACAAAGGCAACAATAAGCTTTCTGCTGTTGGTGTTGTGGAGGAATTATTTGAAGAGGGTTCTGCAATGCTTACAGAGAGGTTAGGCAAGGATTTTCCGTCTAATTCGAATCCTGGGATTTTCCGCTGTGCAGTTTGCCAAGCAGATCAGCCCTCTGTGGATAGTGTATCAATGAACACTGGGTCTTTTTTTCCCCCAGTATCTAAGCCATGGGAAGGTCTGTTCCTCTGCACAAACTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGGTCTACCAGGCCCTCAGAGACAGCATAA 1287 0.4382 MSRTELSNMKQPPVPLATLIGQELRNGKIEKPFVKYGQAGLAKKGEDYFLIKADCQRVPGDSSTLFSVFAIFDGHNGISAAIFAKESILSNVLSAIPQDISRDEWLQALPRALVVGFVKTDIEFQKKGETSGTTATFVLVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGVPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPMLPAIPRKKRSVLTSLLFGKKSPNSTNKGNNKLSAVGVVEELFEEGSAMLTERLGKDFPSNSNPGIFRCAVCQADQPSVDSVSMNTGSFFPPVSKPWEGLFLCTNCQKKKDAMEGKRSTRPSETA* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1368 428 Gene3D - 34 302 IPR036457 -
Gso10g1368 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Gso10g1368 428 CDD PP2Cc 43 297 IPR001932 -
Gso10g1368 428 Pfam Protein phosphatase 2C 62 281 IPR001932 -
Gso10g1368 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 426 - -
Gso10g1368 428 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 426 - -
Gso10g1368 428 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Gso10g1368 428 SUPERFAMILY PP2C-like 38 297 IPR036457 -
Gso10g1368 428 SMART PP2C_4 23 295 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1368 Gso-Chr10 40115721 40118972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1368 1 427 PP2C-type Phosphatase Gene Family AT1G09160 74.941 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1368 - - gmx:100791944 853.588