Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1367 ATGGCGCCAGAGCTTGCCTTGCCATTCTCTGTTGTATCTGTGGTCGAAGATGTTCTTCAAAAGCATGGAAGTCCTTTAATCGACATTGACTTGGCATCAAGGAAGGCTGAAGAAGCTTCCTTAAGAAGGAACGAAGCGGCCGCGTGGCTGCAAAAGACAGTTGGAGGGAAAGACATGCCAGGTGAGCCTACTGAAGAACATTTCAGGATTGCGTTGCGTAGTGGCATTGTCCTTTGCAATGCTCTTAACAATATTCAACCCGGAGCAGTGCCTAAGGTAGTCGAAGCCCCCAACGACAGTGTTATTATTCCTGATGGGGCAGCTCTGTCTGCTTATCAATGCTTTGAAAATGTAAGGAATTTTCTAGTAACTGTGGAGGAAATGGGGCTTCCCACATTTGAAGTTTCTGATTTGGAACAGGGAGGGAAATCTTCGAGGATAGTGAATTGTGTTTTAGCACTTAAGTCTTACAGTGAATGGAAAATGGGAGGAAAAATTGGATCATGGAAATATGGTGGGAATCCAAAGCCACCTGCTCCCTCTGCAAAACCTATTATGTGGAAAAGCTCAGAACCATTCATGAGGTCTTTGTCAAGGGGTTTTTGGTTAGGCGATAGAGATGGTTTGCCGAGTGATAATTCTCCAAGCAGTGTTCTCAGTGAAGAGGGTTCTATTCCCTCCTTGAATTCACTAGTTCGCGAAATTTTATGTAATAAGAAGCAAGAAGAGATTCCCATTGTGGTGGAGTCTCTACTTAGCAATGTCATGGAGGAGTTTGAACAACGCTTGCTAATCCAACAAGAAACATTCAAAACAACTCAAGAAGATAAGGCACCACCTGAAGCAGAGGATTCTAATGTGGAAGCTGCTTGTGATGATGAAGAGCACAATGGCGACGAAGAATCAATTGACCAGCCTTTGAAGCAGCAAAAGTTATTTCAGCAGCAAAATGAAAACGTTCAGGAATTGAAAATGATGGTTCATCAAACAAAAACAGGAATTCAGGTTCTGCAACATAAATACGAGGAGGATATCATCTATCTAAGTAAGCACCTGCTTGGCCTAGCTTCTGCGGCTTCAGGATATCAGAAAATTTTTGAAGAAAACCGCAAGTTATATAATCAATTGCAAGACCTGAAAGGAAATATTAGGGTGTACTGCAGAGTTCGACCCTCAACAAGTGGTCAAACAAACCATCATTGCCCTATCAATAACATAGATGGAGGAAGTATGTCACTAATAATTCCTTCCAAAAATGGGAAAGATGGGAAGAAGACATTTAATTTCAACAAAGTGTTTGGTCCTTCTTCTACCCAAGGGGAGGTTTTCTCTGATACACAACCACTGATTCGTTCGGTTCTTGACGGCTACAATGTGTGTATATTTGCTTATGGCCAGACAGGATCAGGAAAAACACACACTATGTCTGGACCAGACAATTATACTGAGGAAACAGTAGGTGTCAACTACCGCGCACTGAGAGATCTTTTCTTTCTCTCAGAGCAGAGGAAAGACATCATTCACTATGATATATCTGTTCAGATGCTAGAGATTTACAATGAACAAGTCAGAGACCTATTAACCACAGACAGTGCTATAAAAAGATATCCTTTTTTAGAAATTCGCAACAGTTCCCATAATGGCATTAACGTGCCAGATGCAAACCTGGTTCCTGTTTCATCAACTTCCGATGTCTTGAATTTAATGAACTTGGGACAAAAGAATCGGGCAGTTAGTGCTACTGCCATGAATGATCGGAGTAGTCGTTCTCATAGCTGCTTGACAGTTCATGTTCAAGGAAGAGAGCTTGCATCAGGGAATAGTCTTCGTGGTTGTATCCACTTAGTTGACTTGGCAGGAAGTGAAAGGGTTGATAAATCTGAGGTCACAGGAGATAGGCTGAAGGAGGCTCAACATATTAACAAGTCACTTTCTGCTTTAGGAGATGTGATTGCTTCCCTTGCCCAAAAGCAATCACACGTTCCCTATAGGAACAGTAAACTTACTCAGCTGCTTCAAGATTCTCTTGGAGGCCAAGCAAAGACACTCATGTTTGTTCATGTTAGTCCGGATGCAGAAGCCATTGGAGAAACAATTAGCACATTGAAGTTTGCTGAAAGGGTCTCCACTGTTGAACTTGGTGCTGCACGAGTTAACAAAGATAGTTCAGAGGTCAAAGAGCTCAAAGAACAGATCGCTAGTCTGAAGGCAGCCTCAGCCAGGAAAGATGGAGAATTGGAACACTTTCAACAGTATGCAAATAGCATTACTGAAACACCAAAGTTCAAACCTGATTTGACTTCCTTTGCACGGTCACCTAGTTGGTCGCATGGACCTCCTAGGCCACCAAGCAGAGATGATCCTAGTAGCATGGAGGACAAGAAAAAGCCTACACCCAAGTTCATGAAAAGGCGAAGCTTTGATCCCAGGGACATTTGTAGGAAATCACCCCGTTGGCCACATCATGAAAGGGTAAATGGAAAGGAGGATGATAAAGAATCGATTTCTGGGGATTGTGTGAGTAAGAGTACAAAAAAGAATGACCACATTTTAACTACTGATGATAGCCTCGTAGGACGACAGTGTGAAACAGAAAGCAAACGTTCATCTTCTGATTCTTCTCCAATGCTAAGTCCCACAATTCTTTTAGACGTCCCTTCAAAAATATGCATGGAGGTGGCCACCACAAAATCAAATGACTCTGATGAGCTTGAGTTAGCAACTAGTGAAAGTTCAGAATCAGACAAGAGTTGGCAATCACATGATTCACATGCACGTGCACCTAAAGCAACCTCTTTTCCCAACGGATTAGTGTCTAAAACAAGAAAATCAACTCTTAGACGACAAGCAGAAAACCAAGAAACCAGGAGTATGATCCCTTCAATGTCTCCTACATCAACAAGGAGACAAACCACCGTAGTTAGTCAGCTAAGAAAGCATCCAGATGCAAAGAGAAGTGGAAATGCCAAATGA 2973 0.4238 MAPELALPFSVVSVVEDVLQKHGSPLIDIDLASRKAEEASLRRNEAAAWLQKTVGGKDMPGEPTEEHFRIALRSGIVLCNALNNIQPGAVPKVVEAPNDSVIIPDGAALSAYQCFENVRNFLVTVEEMGLPTFEVSDLEQGGKSSRIVNCVLALKSYSEWKMGGKIGSWKYGGNPKPPAPSAKPIMWKSSEPFMRSLSRGFWLGDRDGLPSDNSPSSVLSEEGSIPSLNSLVREILCNKKQEEIPIVVESLLSNVMEEFEQRLLIQQETFKTTQEDKAPPEAEDSNVEAACDDEEHNGDEESIDQPLKQQKLFQQQNENVQELKMMVHQTKTGIQVLQHKYEEDIIYLSKHLLGLASAASGYQKIFEENRKLYNQLQDLKGNIRVYCRVRPSTSGQTNHHCPINNIDGGSMSLIIPSKNGKDGKKTFNFNKVFGPSSTQGEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPDNYTEETVGVNYRALRDLFFLSEQRKDIIHYDISVQMLEIYNEQVRDLLTTDSAIKRYPFLEIRNSSHNGINVPDANLVPVSSTSDVLNLMNLGQKNRAVSATAMNDRSSRSHSCLTVHVQGRELASGNSLRGCIHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVIASLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHVSPDAEAIGETISTLKFAERVSTVELGAARVNKDSSEVKELKEQIASLKAASARKDGELEHFQQYANSITETPKFKPDLTSFARSPSWSHGPPRPPSRDDPSSMEDKKKPTPKFMKRRSFDPRDICRKSPRWPHHERVNGKEDDKESISGDCVSKSTKKNDHILTTDDSLVGRQCETESKRSSSDSSPMLSPTILLDVPSKICMEVATTKSNDSDELELATSESSESDKSWQSHDSHARAPKATSFPNGLVSKTRKSTLRRQAENQETRSMIPSMSPTSTRRQTTVVSQLRKHPDAKRSGNAK* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1367 990 SMART ch_5 42 157 IPR001715 GO:0005515
Gso10g1367 990 MobiDBLite consensus disorder prediction 286 300 - -
Gso10g1367 990 Pfam Kinesin motor domain 388 710 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g1367 990 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 979 - -
Gso10g1367 990 MobiDBLite consensus disorder prediction 894 990 - -
Gso10g1367 990 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 979 - -
Gso10g1367 990 ProSiteProfiles Calponin homology (CH) domain profile. 40 159 IPR001715 GO:0005515
Gso10g1367 990 Gene3D Kinesin motor domain 377 752 IPR036961 -
Gso10g1367 990 MobiDBLite consensus disorder prediction 756 881 - -
Gso10g1367 990 Coils Coil 362 382 - -
Gso10g1367 990 MobiDBLite consensus disorder prediction 786 853 - -
Gso10g1367 990 Pfam Calponin homology (CH) domain 42 159 IPR001715 GO:0005515
Gso10g1367 990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 382 748 IPR027417 -
Gso10g1367 990 Coils Coil 718 745 - -
Gso10g1367 990 MobiDBLite consensus disorder prediction 951 977 - -
Gso10g1367 990 SMART kinesin_4 380 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g1367 990 PRINTS Kinesin heavy chain signature 456 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g1367 990 PRINTS Kinesin heavy chain signature 581 598 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g1367 990 PRINTS Kinesin heavy chain signature 612 630 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g1367 990 PRINTS Kinesin heavy chain signature 661 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g1367 990 MobiDBLite consensus disorder prediction 271 304 - -
Gso10g1367 990 SUPERFAMILY Calponin-homology domain, CH-domain 42 172 IPR036872 -
Gso10g1367 990 ProSiteProfiles Kinesin motor domain profile. 382 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso10g1367 990 CDD KISc_C_terminal 380 713 - -
Gso10g1367 990 Gene3D - 26 171 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1367 Gso-Chr10 40097852 40104643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1367 370 745 Calmodulin-binding Proteins AT5G65930 40.691 7.87e-76 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1367 K10406 - gmx:100808197 1900.56