Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1341 ATGGACCAGGTTTGTAAAGCAATGGATTGTGGTGGCACACAAGTTTCACGTACCATCGTAGTCGATCAATCTGGCAAATCAGATTTTCATACCATTCAAGCTGCCATTGATTCAATAAAGACAAGCAACAATAAATGGGTGAAAATTCACATAAAGGCTGGCACATATACAGAGCAGATTCAAATTCCATATAACATGCCGTGCATCTTTTTGGAAGGCCAAGGAAAAGAAGTCACCACTGTTACATACAATGACCACCAAAAAACAGATATTAGTGCCACGTTCTCTTCATTTCCAGACAATGTTGTTGCATCGGGCATTACTTTTAAGAACTCGTTTGATACTGCGGCAATATTAAGTTATGATGGGAAACGAATCCCAGCATTGGCTGCAAGGATATATGGAGACAAATCTGCATTTTACAATTGTAGTTTCATCGGTTTTCAAGATACATTGTGGGATGTGGAAGGTCGTCACTACTACAAAAATTGTCTCATTGAAGGTGCTGTCGACTTCATATGGGGCAGTGGACAATCTTATTTTGTGGATTGTGTGCTCAATGTGACTTCTTCGGGTTCCATAACAGCACAAGGACGCAGTTCAAATAGCGACCCAAGTGGTTTTGTGTTCCAACGAGGTTCTGTGGTTGGTAGCGGGAGCGCGATATTAGGGAGAGCCTATGATCGTTGTTCTAGAGTTATATTTTATGACACAAACTTGGGATCTGTGGTTGACCCTCAAGGATGGAATGCTTGGCATTATACAAAACATGAGGATTGCATTTACTACGCTGAGGTTGGATGTACGGGTGTAGGTGCTAATACTTCCAAACGCGTTCCTTGGAGAAAGAAATTGACAATCTCAGAATTCAGACAACAATTTTCGACGTCAGTGTTCATCGACCACGAAGGCTGGCTCTCAAAAATACCATTGAACTGA 939 0.4153 MDQVCKAMDCGGTQVSRTIVVDQSGKSDFHTIQAAIDSIKTSNNKWVKIHIKAGTYTEQIQIPYNMPCIFLEGQGKEVTTVTYNDHQKTDISATFSSFPDNVVASGITFKNSFDTAAILSYDGKRIPALAARIYGDKSAFYNCSFIGFQDTLWDVEGRHYYKNCLIEGAVDFIWGSGQSYFVDCVLNVTSSGSITAQGRSSNSDPSGFVFQRGSVVGSGSAILGRAYDRCSRVIFYDTNLGSVVDPQGWNAWHYTKHEDCIYYAEVGCTGVGANTSKRVPWRKKLTISEFRQQFSTSVFIDHEGWLSKIPLN* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1341 312 Pfam Pectinesterase 19 301 IPR000070 GO:0030599|GO:0042545
Gso10g1341 312 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 4 311 - -
Gso10g1341 312 PANTHER PECTINESTERASE 4 311 - -
Gso10g1341 312 Gene3D - 12 312 IPR012334 -
Gso10g1341 312 SUPERFAMILY Pectin lyase-like 13 308 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1341 Gso-Chr10 39747515 39749967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1341 9 258 Carbohydrate Esterase AT2G19150 44.961 3.88e-73 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1341 - - gmx:100800737 648.662