Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1336 ATGTCCGAAGACAAGTACGGCGTGCTCCTCTATTACAAGTACGCCGAAATTCCCAACCTCGACGACCTCCTCACCTTCTACCACTCCAACTGCTCCTCCCTCAGCCTCCTCGGTCGTGTTCGCCTTTCTTCTCACGGCGTCAATGTCACCGTTGGCGGCAACTTATCCTCTCTCGGGAATCACATCCAAGCCCTCAAAGCCTACAGCACCTTGTTTCACCACACTGATTTCAAGCTCGCCACTTGTCATCATCCATTAAACGACAAAGTAGCCCAGGAATGTGGTTTCACTTCCCTCTCTATTCGAATCGTCCACGAACTTGTTACTCTCAGTTCCCATCCACTGTTAAAGTCACCGAATATCTCAAATGCCGGAAAGCATCTCTCTTCCCTCCACAATACCAACAGTGAGAGTCCCGAAAAAGGCCTTGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGAATTGGCAAGTTTGATGTGCCAAATGTTGAAACTTTGGATCCACAAGTTAGGCAGTTTAGTGATTTGTCCTCTTGGATAGATGACAATGGGGAGCGGTTGAAAGGAAAAAATATACTCATGTATTGTACTGGTGGAATCAGGTGTGAAATGGCATCGGCATATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGCATACAACGGTATTTGGAGCAATTCCCAGATGGTGGGTTTTTCAAAGGAAAAAATTTTGTTTTTGATCACCGGATATCAGTTGGAAGTTCAGATGCTAATGTTATTGGGACCTGTCTTATTTGTCAATGTTCATTTGATGATTACTCTTCTCGCTGCCGGTGTGCTTACTGCCGAATGCTTGTTTTGGTTTGTGGTAGTTGCCAGAATGAATCTACACAGTACGTTTGTGAGCTATGTCAGAAACAGGGAAAGGCCGTTAGGTCAACACAATTAATTGAAAATGGTGAATCAAAAACATCATTGCCAGGTGTTGAATTCCAGAATTTTTCTTCAGATACTACTATGTGTTTGCCTCAAGTGCCTAGGGGAGATGATCCAAGGACCTCAAGAAAACTGAGAATATTGTGCTTGCATGGGTTCCGACAGAATGCATCCAGTTTCAAAGGCAGAACAGCATCACTAGCCAAGAAACTCAAGAAAATGACTGAATTTGTTTTTATCGACGCACCTCATGAATTGCCATTCATTTACCAAACCCCCATGCCTGAGCTCAATGTGAATTGTGCATCGTCATCGCCACCTAGTCCTCCTCCACCTTTGGATAATTGCAAGAAGAAGTTTGCATGGTTTGTGGCACCCAACTTTGATGGAAGTAGTGCTGCTGACTGGAAGGTAGCAGATGGTCCATTTGATCCACTTCAATACCAGCAGCAAACTAATGGATATGATATTTCGGTATCACACTTGAAGAATGTGTTTTCCCAAGAAGGACCATTTGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGACTGCCTTGATCTCTGCACAACAAGAAAAGCTGAAAGGTGAAATGGACTTTAAATTTGTAGTCCTGTGCTCTGGCTTTGCCCTCCGGATGAAGGAGATGGAGTGTGGCCCTATCAAGTGCCCTTCTCTTCATATTTTTGGTAATGAACATGGTAAAGACAGACAGATAGCTAACCAAGCTAGCAAGGAACTTGCTTCTCTATATGATAGTGATTGTTCTGCGATCGTTGAGCATGATTGTGGTCATATAATTCCTACCCGGTCCCCTTACATAGATGAGATCAAGGATTTCCTTGGGCGTTTTCTGTAG 1800 0.4367 MSEDKYGVLLYYKYAEIPNLDDLLTFYHSNCSSLSLLGRVRLSSHGVNVTVGGNLSSLGNHIQALKAYSTLFHHTDFKLATCHHPLNDKVAQECGFTSLSIRIVHELVTLSSHPLLKSPNISNAGKHLSSLHNTNSESPEKGLVLLDARNLYETRIGKFDVPNVETLDPQVRQFSDLSSWIDDNGERLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANVIGTCLICQCSFDDYSSRCRCAYCRMLVLVCGSCQNESTQYVCELCQKQGKAVRSTQLIENGESKTSLPGVEFQNFSSDTTMCLPQVPRGDDPRTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKMTEFVFIDAPHELPFIYQTPMPELNVNCASSSPPSPPPPLDNCKKKFAWFVAPNFDGSSAADWKVADGPFDPLQYQQQTNGYDISVSHLKNVFSQEGPFDGILGFSQGAAMTALISAQQEKLKGEMDFKFVVLCSGFALRMKEMECGPIKCPSLHIFGNEHGKDRQIANQASKELASLYDSDCSAIVEHDCGHIIPTRSPYIDEIKDFLGRFL* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1336 599 Gene3D - 116 268 IPR036873 -
Gso10g1336 599 SMART rhod_4 129 236 IPR001763 -
Gso10g1336 599 Pfam Rhodanase C-terminal 241 306 IPR022111 -
Gso10g1336 599 Pfam UPF0176 acylphosphatase like domain 7 106 IPR040503 -
Gso10g1336 599 Gene3D alpha/beta hydrolase 354 599 IPR029058 -
Gso10g1336 599 Gene3D - 1 108 - -
Gso10g1336 599 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 598 - -
Gso10g1336 599 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 598 IPR020936 -
Gso10g1336 599 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 129 253 IPR036873 -
Gso10g1336 599 Pfam Serine hydrolase (FSH1) 356 590 IPR005645 -
Gso10g1336 599 ProSiteProfiles Rhodanese domain profile. 139 239 IPR001763 -
Gso10g1336 599 SUPERFAMILY alpha/beta-Hydrolases 354 599 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1336 Gso-Chr10 39685377 39689255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1336 3 599 Sulfurtransferasese or Rhodanese AT1G09280 63.097 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1336 - - gmx:100799148 1206.43