Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1328 ATGGCCGGTAAAGGGACCCATTCAGATTCAAAAGCAGCAACAATTGTGATTAAGGATCTGAGATTCACATACCCCGGCATCGACGGCCACCCTCCGCCGGGTTCCACTCCCCTCATTCAGGATTTCAATCTCACTCTTTCTTCCGGCCATCGCTGCCTCCTCGTCGGTTCCAACGGCGCCGGAAAGACCACTCTCCTCAAGATATTAGGAGGGAAACACTTGGTGGAGCCTGACATGGTTCGCGTGCTCGGAAGATCAGCTTTTCACGACACCACTCTAATATCTTCTGGTGATCTCTGTTACCTTGGTGGCGAGTGGAGGCGAGATGTTGCTTTTGCGGGTTTTGAGGTTCCAATACAAATGGACATATCTGCTCAAAAAATGATATTTGGTGTGCCTGGGATTGATCCTCAAAGAAGAGCCGAGCTAATCAAGGTATTAGATATCGATCTTTCCTGGAGATTGCATAAAGTATCTGATGGTCAAAGAAGAAGGGTGCAGATTTGTATGGGTCTCCTCAAACCATTCAAGGTTCTTCTTCTCGATGAGATAACAGTTGACCTTGATGTTCTAGCAAGAGCTGACCTTCTGAGATTTCTAAGAAAGGAATGTGACGAGAGGGGTGCCACTATTATCTATGCAACACATATATTTGACGGCCTCGAGGATTGGCCAACAAATATTGTTTATGTAGCCCATGGGAAGCTGCAACTAGCAATGCCTATGGACAAAGTCAAAGAAATTAGCAAATTATCACTAATGAGAACAGTAGAAAGTTGGCTGCGGAAAGAACGAGATGAAGATAGAAAGAAAAGGAAAGAGAGAAAAGCAGCTGGTCTTCCTGAATTTGGAAAGCGAGTTGAGGAAAGCCGTGTAACAGGGGATCCAGCGCGTGCTGCAGTTCGAGTAATTAATAATGGTTGGGCTGCAGGACGATTAACTTCCACCGTTGCTGGTGAGGAAAACTTTCTCCTGAGCTCAAACCGAGTATTGAGGCAGTAG 1002 0.4611 MAGKGTHSDSKAATIVIKDLRFTYPGIDGHPPPGSTPLIQDFNLTLSSGHRCLLVGSNGAGKTTLLKILGGKHLVEPDMVRVLGRSAFHDTTLISSGDLCYLGGEWRRDVAFAGFEVPIQMDISAQKMIFGVPGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECDERGATIIYATHIFDGLEDWPTNIVYVAHGKLQLAMPMDKVKEISKLSLMRTVESWLRKERDEDRKKRKERKAAGLPEFGKRVEESRVTGDPARAAVRVINNGWAAGRLTSTVAGEENFLLSSNRVLRQ* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1328 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 250 IPR027417 -
Gso10g1328 333 Gene3D - 12 280 IPR027417 -
Gso10g1328 333 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 12 332 - -
Gso10g1328 333 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 258 IPR003439 GO:0005524
Gso10g1328 333 PANTHER ABC TRANSPORTER I FAMILY MEMBER 20 12 332 - -
Gso10g1328 333 SMART AAA_5 48 235 IPR003593 -
Gso10g1328 333 Pfam ABC transporter 40 185 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1328 Gso-Chr10 39608402 39611593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1328 17 212 Calmodulin-binding Proteins AT2G36910 23.474 7.32e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1328 K12608 - gmx:100782386 638.262