Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1326 ATGGCGAGTAGTGTTATTCCACTGTTGGCCATGATTATTGTACAATTGGGCTATGCAGGGATGAATATTACCTCAAAGCTTGCAATACAATCTGGCATGCACCCTCTTGTTCTCGTTGCTTATCGCCAAATTTTTGCAACTATTTCCCTTGCTCCCTTCGCTTTTTGGTTAGAACGGAATACGGCTCCCCGAATGACAAAGCACATTGCGTTCCAGATATTACTATCTTCCTTAACAGGAGTAACAGGAAATCAGATTCTATACTTCTTGGGGCTTAAATATTCAACCCCTACAATTGCATGTGCACTAAACAACTTGCTACCAGCATTCACTTTTATTCTTGCTGTCCTCTCCAGACAAGAGTATTTGAGAATCAAGACTAGGGCAGGGGTAGCGAAGGCCTTAGGGACAGTCCTTAGTGTGGGTGGAGCAGTGCTTTTATCATTTTACCATGGAAAAGTACTTGGTCTAGGTGAATCAAAGATTCACTGGAGATATGCAGAAAACATGCAAAGAGAATCCTCTTCTTCTGGTGGTGGAAGAAACCATCTTCTGGGCCCTGTTGCTGTAATTGTTAGTGCTCTTGTTTGGGCAGTATGGTTCATAGTTCAAAAAAACATGAGCAAGAGCTATCCAGCTCCTTACACTAGCACTTTCTACATGTGTTTGATGGCAAGCATTCAGTGTGTGGTCATTGCCTTGGCTGCTGAACACAATGTCTCAGCTTGGTCACTCCACAGTACTATAAGACTAACCTCTGCTCTTTATGCGGGGACTATTTCTACTGCGCTAGCGTATGTGCTCCTTGCGTGGACCATTGAGAGGAAAGGTCCTCTCTATGTGTCTGTGTTCTCCCCTTTGCTGCTTGTCATCATTGCTGTTGCTAGCTGGGCTTTTCTTCACGAGCAATTATACGTTGGCACTGTCATAGGGTCTCTGCTGATAGTGTTGGGGCTGTATTTTGTTCTGTGGGGAAAGAACAAAGAGATGAATAAGATAGACGTTGTTGAAGTTGAAGGCACGGTCATGGAGGCAATAAAGGATAGCGAGAAGGATGAGGTGAAAGACCTGGAATTGCAACCCTATGAATATGATCCTTCCAACGTTAACGGTTACCATCATGATGCTAATTAA 1134 0.4374 MASSVIPLLAMIIVQLGYAGMNITSKLAIQSGMHPLVLVAYRQIFATISLAPFAFWLERNTAPRMTKHIAFQILLSSLTGVTGNQILYFLGLKYSTPTIACALNNLLPAFTFILAVLSRQEYLRIKTRAGVAKALGTVLSVGGAVLLSFYHGKVLGLGESKIHWRYAENMQRESSSSGGGRNHLLGPVAVIVSALVWAVWFIVQKNMSKSYPAPYTSTFYMCLMASIQCVVIALAAEHNVSAWSLHSTIRLTSALYAGTISTALAYVLLAWTIERKGPLYVSVFSPLLLVIIAVASWAFLHEQLYVGTVIGSLLIVLGLYFVLWGKNKEMNKIDVVEVEGTVMEAIKDSEKDEVKDLELQPYEYDPSNVNGYHHDAN* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1326 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 148 - -
Gso10g1326 377 Pfam EamA-like transporter family 7 148 IPR000620 GO:0016020|GO:0016021
Gso10g1326 377 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Gso10g1326 377 PANTHER WAT1-RELATED PROTEIN 1 345 IPR030184 GO:0016021|GO:0022857
Gso10g1326 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 328 - -
Gso10g1326 377 PANTHER WAT1-RELATED PROTEIN 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1326 Gso-Chr10 39598439 39602184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1326 3 327 Nodulin-like Gene Family AT1G09380 59.692 1.60e-145 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1326 - - gmx:100781298 741.495