Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1317 ATGGGCGGAGGAGGCGGAGCGGCGACGGCGCAGGCAGAGGCGCAGTACTCGACGGCGAAGACGTCGGTGTGGTGGGACATAGAGAACTGTCACGTGCCGAAAGGATGCGATCCCCACGCCATCGCGCAGAACATAAGCTCCGCCCTCGTTCGCACGAACTACTGCGGCCCCGTTTCCATCTCCGCCTACGGCGACACCACTCGCATCACTGCCGTCGTCCAGCATGCCCTCTCCAGCACCGGCATCTCCCTCAACCATGTCCCCGCCGGCGTTAAAGATGCAAGTGACAAGAAGATTCTGGTTGACATGCTGTTCTGGGCAGTGGACAATCCTGCACCTGCTAATTACTTATTAATTTCTGGTGATCGAGATTTTTCCAATGCCCTTCATCAGTTGCGGCTCAGGAAGTATAATATCCTTCTTGCACAACCTCAGAAAGCTTCTGCACCATTAGTGGCAGCTGCTAAGAGTGTGTGGCTTTGGACTAGTCTCTTGGCTGGAGGACCCCCTCTTATGAATGGTGAATCACAACAACTTGGTAATAATAACATCCAATCATCTTCAGACACCTTACCTATTCCTGTCTCTAATGCTGTTCAGATACCACAGCACATGGGTTCCTTTTCAGAAGTTCATGCAGGAAATCAGAAATTTCCAAACACAGGAAGGCAACTTGATTCTAGACATCATGGGAAAACGAATGGGAGAAATCCAAGTAAAACAAATGGACCCAAGGCCCTGAATCCAGCTCCAGAAAATTATAGCAATATAAATTCTTCTCAAACTGGCAACTATACCCATAATGTTCCCCCAAGTGGATCTACCCCAAATTTTATTTGTGGCAATCCTGATCAAATGCGGGGCAAGAATGGTAATCTACATTCACAGCCATTAAGATCAAACTCTTTTCCTTTGCAACCTCCTTTTATACCAAATAATTCATTTTCTCCAAATCCCCAAACTTTTGCAACTTCAGTAGTGCCACCTAGAACTGGTGGACCCAGCTTCTCTGCAGCACCACTACTTAATGTACCAAATATTAGCAATCGGAAAATTTCTGGATATCCTAGTAATGCTCATGATCCACGCCCTGTTAAACAATGGAATGGAGACTTGAAACAAAGTTCTAACAATAATGCTCCAAGTCCTGTAAAGTCAATTGGCGAACAAACTGGACATATGGTACAGAACACACAACAATTGTATAATGGCCATCCACATGGTCCAGAATACCAACCTACATCATTGACAACTATGGGTAATAATAACCTTCCTGGCAATGGTATATGGGGATCTCCAGGATGCCCTAAACCTTCTGAATATGTCCAAGGTCTTATAGGGGTTGTTTTACTTGCCTTGAACACATTAAAAATTGAAAAAATTATGCCAACTGAGGCAAATATAACAGATTGCATTCGATGTGGAGATCCCAAGCACCGCAACACAGACGTCAAGAAGGCTCTGGAGAATGCTATTGAGCAGCAGATGGTGGTGAAGCAGAATGTAGGTGCTTTGCAGTTGTTTATTGGTAAGAATGATAAGGTTTGGAAGTGTGTAAGCCCTGTAGGTGGTAATCCTAAGAAGCACTCAAAAGAGACATGGAATGAAATTAAAAAATTCCTATCAACTCCTTCTGGAAGATTAGTCATAATGGGTACTCAGTGCAAGTATGAAGCAGGTATTGTGATTAGAAATATGTGCTTGAAAAATCATGCTTTGGGTGATGTCCTACAGATTTTGAACATGTTGATTACCATTAAAAAATGGATTGTGCATCAACAATCTGGCTGGCAACCACTTAACATCACTCTTACTGAGGTCAATTCTGATTCAGAGGACATAGCATGCCCATAG 1854 0.4417 MGGGGGAATAQAEAQYSTAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRTNYCGPVSISAYGDTTRITAVVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRLRKYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLMNGESQQLGNNNIQSSSDTLPIPVSNAVQIPQHMGSFSEVHAGNQKFPNTGRQLDSRHHGKTNGRNPSKTNGPKALNPAPENYSNINSSQTGNYTHNVPPSGSTPNFICGNPDQMRGKNGNLHSQPLRSNSFPLQPPFIPNNSFSPNPQTFATSVVPPRTGGPSFSAAPLLNVPNISNRKISGYPSNAHDPRPVKQWNGDLKQSSNNNAPSPVKSIGEQTGHMVQNTQQLYNGHPHGPEYQPTSLTTMGNNNLPGNGIWGSPGCPKPSEYVQGLIGVVLLALNTLKIEKIMPTEANITDCIRCGDPKHRNTDVKKALENAIEQQMVVKQNVGALQLFIGKNDKVWKCVSPVGGNPKKHSKETWNEIKKFLSTPSGRLVIMGTQCKYEAGIVIRNMCLKNHALGDVLQILNMLITIKKWIVHQQSGWQPLNITLTEVNSDSEDIACP* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1317 617 CDD PIN_limkain_b1_N_like 20 144 - -
Gso10g1317 617 Pfam NYN domain 20 156 IPR021139 GO:0004540
Gso10g1317 617 Gene3D - 11 163 - -
Gso10g1317 617 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 3 602 - -
Gso10g1317 617 MobiDBLite consensus disorder prediction 355 381 - -
Gso10g1317 617 MobiDBLite consensus disorder prediction 236 250 - -
Gso10g1317 617 MobiDBLite consensus disorder prediction 211 250 - -
Gso10g1317 617 PANTHER LIMKAIN B LKAP 3 602 IPR024768 GO:0005777|GO:0010468|GO:1903231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1317 Gso-Chr10 39470880 39474666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1317 12 217 C2H2 Transcription Factor Family AT5G61190 67.308 4.16e-82 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1317 - - gmx:100794384 1255.74