Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1311 ATGGCCGGTGACGGTGCAGCTACATGCATAGACATCCTTCTTGCCATTATTCTCCCTCCTCTTGGTGTCTTTCTCAAATATGGTTGCCAGGTGGAGTTCTGGATTTGTTTGGTGCTGACCCTTTTTGGTTATATACCTGGAATTATCTATGCTGTCTATTCTATCACCAAGTGA 174 0.4425 MAGDGAATCIDILLAIILPPLGVFLKYGCQVEFWICLVLTLFGYIPGIIYAVYSITK* 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1311 57 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 5 57 IPR000612 GO:0016021
Gso10g1311 57 Pfam Proteolipid membrane potential modulator 9 55 IPR000612 GO:0016021
Gso10g1311 57 ProSitePatterns Uncharacterized protein family UPF0057 signature. 13 28 IPR000612 GO:0016021
Gso10g1311 57 PANTHER HYDROPHOBIC PROTEIN RCI2B 5 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1311 Gso-Chr10 39342978 39344266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1311 5 57 RCI2 Gene Family AT3G05890 75.472 2.87e-25 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1311 - - gmx:100775235 114.005