Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1306 ATGTCTTTTGGTAAACTGTTGCGGTTGTCTCCTTACTCTCTCAAAGATTTTGAAAATGCAATTAGCCACAAGGAAAGCAATGTAGTTCTTCTAGTGGAATCTCATGTAGTACTCTTACTAGTGCTCATCAAAGGTGATGATGAATACTCTGCAGCTGTTCTGGAAAAAATACAGAAGAAGAGTGAATATTTTGATTGGGAGATGGAGAAATGGCAAATTCGTACAAGTCCCTTAGGTAAGGACAAATATTATAATAGGTATTGGTGGTTTCACCGTGATGGGAGGATATTTGTTGAAAGTTCTGACTCCAAGGTATCAGGAGTCTACAGTAGCCAAGAAGAGCTTTATGCATTGATGAGTTCACTGAATTGCAAAGGTGTAAGGGAAAGGTCACTGCATAAACAATTGGAAAAATATTATAATAGAATATGCTCTGAACTGCAGAAAAGTTCAAAGGATTTGGTGCATAAGGTTGCCCAGGATGACTCTATGGTCCGAAGGTCTACTCGTGTTTGGGCTCCACCTAGGGAAAATCCTTCCAAAGCTTTCGTCAAATATGCCAATGACACATTAAGAAGAATTGGAAAGGGATCGCGAGGTCATGTTGTTGTATTGCCTACTGTTGTTGTCAATAATCGACAATATCGAGATGTGGAGACAAATGAGTGCTTGACAAACAATGGTGGTTGCTGGAAGGATAATTTAGATGAAGCACTATTAGAGAATGAATTTAGATGA 738 0.3889 MSFGKLLRLSPYSLKDFENAISHKESNVVLLVESHVVLLLVLIKGDDEYSAAVLEKIQKKSEYFDWEMEKWQIRTSPLGKDKYYNRYWWFHRDGRIFVESSDSKVSGVYSSQEELYALMSSLNCKGVRERSLHKQLEKYYNRICSELQKSSKDLVHKVAQDDSMVRRSTRVWAPPRENPSKAFVKYANDTLRRIGKGSRGHVVVLPTVVVNNRQYRDVETNECLTNNGGCWKDNLDEALLENEFR* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1306 245 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 54 190 - -
Gso10g1306 245 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 2 58 - -
Gso10g1306 245 Pfam DDT domain 2 43 IPR018501 -
Gso10g1306 245 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 73 139 IPR028941 -
Gso10g1306 245 ProSiteProfiles DDT domain profile. 1 48 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1306 Gso-Chr10 39199358 39201578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1306 137 233 Miscellaneous Gene Families AT2G14720 33.600 4.86e-13 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Gso10g1306 WSD 1.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1306 - - gsj:114371741 484.182