Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1304 ATGAGAATGGGGAACCTCTTCTGGCTTGGCATTGTTGCAGCACTTGTTTTCAGCTTCTGGGTTGATTCCTTTTCTGCCTATGAATATCACCACTTCAATGAAACCGAGTTCTCTTTGTTGGAGTCTCAAGAACAGGTACATTCATCCCTCCTTGGGAGAACTTCTCTCATGGTTGGACTCACAGTTATTCAAAGTGCTGCTGGCAAAGGAGCAGTTTGCTTGGATGGAACATTGCCTGCTTATCATTTGCATCGGGGATATGGATCAGGAGCAAACAGCTGGATCGTTAATTTAGAGGGAGGTGGGTGGTGTAATGACGTTAGATCATGTGTTTATCGCAAGAAAACACGGCGTGGGTCATCAACATTCATGGAAAAACAGATACCTTTTACTGGAATATTAAGCAATAATGTTGAAGATAATCCAGATTTTTTCAACTGGAACAGAGTGAAAATTCGTTATTGTGACGGTGCCTCTTTTGCTGGGGATGGTGAAGATAAGGCTGCGCAACTGCAATTTAGAGGACAGCGTATTTGGTCGGCAGCAATCGAAGATTTGATGTCAAAGGGAATGCGATTTGCCAGGCAGGCTCTTCTTTCTGGATGCTCGGCTGGTGGTTTGGCTACTATTATACACTGTGATGAATTCAGAGGTTTTTTCCCACAGACTACGAAAGTGAAGTGTCTTAGTGATGCAGGATTATTTCTTGATGCGATTGATGTCTCCAGGGGACATACCATCAGGAATTTTTTCAGTGGTGTCGTAAGGCTACAGGGAGTGCAAAAGAATCTGCCACACATTTGTACTAGTCACCTTGATCCCACTTCGTGCTTCTTCCCTCAGAATTTGATTGCTGGTATTAGAACCCCGCTATTCATTCTTAATACTGCCTATGACTCATGGCAGGTCCAATCAAGCTTAGCTCCTTCATCAGCAGATCCCCATGGCTTTTGGCATGATTGCAGATTAAATCATGCTAAATGTACTTCTTCACAAATCCAATATTTGCAAGGATTCAGGAATCAAATGCTGAATGCTATTAAAGGCTTCTCAAGATCACGTCAGAATGGATTGTTCATAAATTCATGTTTTGCTCACTGCCAATCTGAGAGGCAGGATACATGGTTTGCTGACAACTCTCCTGTCATTGGGAACAAGGCAATTGCTCTTTCTGTTGGAGACTGGTATTTCGACCGAGCAGTTGTTAAGGCCATTGATTGTCCTTACCCTTGTGATAATACATGCCACCATCTTGTCTTCAGATGA 1266 0.4305 MRMGNLFWLGIVAALVFSFWVDSFSAYEYHHFNETEFSLLESQEQVHSSLLGRTSLMVGLTVIQSAAGKGAVCLDGTLPAYHLHRGYGSGANSWIVNLEGGGWCNDVRSCVYRKKTRRGSSTFMEKQIPFTGILSNNVEDNPDFFNWNRVKIRYCDGASFAGDGEDKAAQLQFRGQRIWSAAIEDLMSKGMRFARQALLSGCSAGGLATIIHCDEFRGFFPQTTKVKCLSDAGLFLDAIDVSRGHTIRNFFSGVVRLQGVQKNLPHICTSHLDPTSCFFPQNLIAGIRTPLFILNTAYDSWQVQSSLAPSSADPHGFWHDCRLNHAKCTSSQIQYLQGFRNQMLNAIKGFSRSRQNGLFINSCFAHCQSERQDTWFADNSPVIGNKAIALSVGDWYFDRAVVKAIDCPYPCDNTCHHLVFR* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1304 421 PANTHER PECTIN ACETYLESTERASE 5 420 - -
Gso10g1304 421 PANTHER NOTUM-RELATED 5 420 IPR004963 GO:0016787
Gso10g1304 421 Pfam Pectinacetylesterase 54 400 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1304 Gso-Chr10 39139411 39144625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1304 2 421 Carbohydrate Esterase AT1G57590 64.387 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1304 K19882 - gmx:100810716 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1893 19 47650100 47653969 Gso10g1304 10 39139411 39144625 PCT
Gso3g1929 3 44823206 44828245 Gso10g1304 10 39139411 39144625 PCT
Gso10g1304 10 39139411 39144625 Gso19g1893 19 47650100 47653969 PCT
Gso10g1304 10 39139411 39144625 Gso3g1929 3 44823206 44828245 PCT