Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1289 ATGGATGATTCGAAGCAGCAGCAGCAACGGAAAAAAAACTACCGAAAGAGAAGCGCTCCAACAGACGAAGATGAACTTCCTCAATCTCAAAGTAACAATGAATCCGACGACGAACGAGAAAGAAGAATGGCATTGGAGGAAATTAAGCTCCTCCAGAAGCAGCGGGAAAGGAAATCGGGAATTCCAGCAAACCCTAGTTTGCAGGTGCAGAGTGGAACCGGCGGCGGTTTAGCTGCTAAAGCCGCCGAAAAGAACGATGGCGATGGCGGCGACAAGGACGAGCTCGTTCTTCAAGACACCTTCGCTCAAGAGACCGCTGTTATGGATGAAGACCCCAATATGGTGAATTATATCGAGCACGAGTTAGCGAAGAAGAGGGGAAGGAAAATTGATGCAGCGGATCAAGCTGAGAATGAGCTGAAACGTGCTGAAGATGAACTATATAAGATCCCTGAGCATCTTAAAGTAAAAAGGCGAAATTCAGAAGAAAGCTCTACTCAGTGGACTACTGGTATTGCTGAGGTTCAGCTTCCAATCGAATATAAATTAAAAAATATTGAAGAAACAGAAGCCGCCAAAAAGCTTCTACAGGAAAAGAGGCTTATGGGTCGAACAAAATCAGATTTCAGCATTCCATCAAGTTACAGTGCTGATTATTTCCAGCGTGGCAGGGATTATGCGGAAAAACTTAGAAGAGAACATCCAGAGTTGTACAAAGATAGAAATCACCAGGATGATAGTTCTGGATCCAAGAAAAATGATTCCAGCACTGATGCAGCTGGAGCAGTCCAGAGGCAGGCTGCAACCGATGAATTCATGTTAGAGCGCTTCAGGAAACGAGAACGTCACCGTGTAATGCGAAGATGA 867 0.451 MDDSKQQQQRKKNYRKRSAPTDEDELPQSQSNNESDDERERRMALEEIKLLQKQRERKSGIPANPSLQVQSGTGGGLAAKAAEKNDGDGGDKDELVLQDTFAQETAVMDEDPNMVNYIEHELAKKRGRKIDAADQAENELKRAEDELYKIPEHLKVKRRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRTKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRNHQDDSSGSKKNDSSTDAAGAVQRQAATDEFMLERFRKRERHRVMRR* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1289 288 Pfam Hepatocellular carcinoma-associated antigen 59 100 195 IPR010756 -
Gso10g1289 288 Coils Coil 126 146 - -
Gso10g1289 288 MobiDBLite consensus disorder prediction 59 73 - -
Gso10g1289 288 PANTHER TELOMERE LENGTH AND SILENCING PROTEIN 1 TLS1 FAMILY MEMBER 7 284 IPR010756 -
Gso10g1289 288 MobiDBLite consensus disorder prediction 32 56 - -
Gso10g1289 288 MobiDBLite consensus disorder prediction 230 288 - -
Gso10g1289 288 Coils Coil 179 199 - -
Gso10g1289 288 MobiDBLite consensus disorder prediction 1 23 - -
Gso10g1289 288 MobiDBLite consensus disorder prediction 230 252 - -
Gso10g1289 288 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1289 Gso-Chr10 38915509 38918637 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1289 - - gmx:100812323 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0056 2 685410 687734 Gso10g1289 10 38915509 38918637 GST
Gso10g1289 10 38915509 38918637 Gso19g1573 19 44650189 44652184 PCT
Gso10g1289 10 38915509 38918637 Gso3g1591 3 41840013 41842112 PCT