Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1283 ATGACAATGAAGCTGGTTTTGGTAGTTGTTGAAGTTGCATGCTTAGTTTCTGGGATCTTGTCCTTTGGATCTGAGACACTCTCTGAGCTTTCTTTCTTAGAAAACGATGTCGTCTCAACAACAAGACCTTCCTCTTCATCTCAACCTCAACCTCTTATGGTGGACCTCACTCTCATTCATGAAGCTGATTCTAAAGGAGCTGTCTGTTTGGATGGAACGGTGCCTGGATACCATTTGGATCGTGGATTTGGATCTGGTGCAGATAGTTGGCTTATTCATTTGGAGGGAGGAGGATGGTGTAATACCATCAGAAACTGTGTCTATAGAAAAAATACTCGTCGTGGATCCTCAAAATACATGGAAAATCAAATACCATTCACGGGAATATTGAGCAACAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTTAAATTACGGTACTGTGATGGAGCATCTTTCAGTGGAGATAGTGAAGATGAGTCTGCACAGCTCCAGTTTCGAGGACAAAAAATATGGCTAGCTGCAATGGAGGAATTAATGTCCAAAGGAATGCAGAAAGCCGATCAGGCACTTCTCTCTGGATGCTCTGCGGGTGGTCTGGCATCCATAATACACTGTGATGAGTTCGGGAGCTTGTTTGGAAAATCTTCCAAAGTTAAATGTTTGAGCGATGGAGGTTTTTTTCTTGATGCAATGGATGTATCTGGGGGACGCACACTGAGGACTCTTTTCGGAGGTGTGGTTCAGTTGCAGGATGTACAAAAAAATCTGCCAAAAAGTTGTCTCGACCAACTAGACCCAACTTCGTGCTTCTTTCCTCAGAATATGATCGAACATGTTGAGACCCCATTGTTTCTACTCAATGCTGCTTATGATGTGTGGCAGGTCCAAGCCAGTTTAGCCCCACCTTCAGCTGACCGCCTTGGTTCTTGGAATGAATGCAAATCGAACCATGCAAATTGTAGCTCATCTCAAATGCAGTTCCTTCAAGACTTCAGAAATCAAATGCTGGGTGACATTAAAGACTTCTCAAGCTCATCTCAAACTGGGCTATTCATAAATTCTTGTTTTGCTCATTGTCAGTCTGAGAGACAGGAGACATGGTTTGCTGATGACTCTCCCCTTATCGAGGACAAGCCAATTGCAGTTGCTGTTGGAGACTGGTATTTTGATCGAGAAGTTGTCAAAGCTATTGACTGTGCTTACCCGTGTGACAACAGCTGCCATAATCTGGTGTTTAACTTTAAGTGA 1260 0.431 MTMKLVLVVVEVACLVSGILSFGSETLSELSFLENDVVSTTRPSSSSQPQPLMVDLTLIHEADSKGAVCLDGTVPGYHLDRGFGSGADSWLIHLEGGGWCNTIRNCVYRKNTRRGSSKYMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDSEDESAQLQFRGQKIWLAAMEELMSKGMQKADQALLSGCSAGGLASIIHCDEFGSLFGKSSKVKCLSDGGFFLDAMDVSGGRTLRTLFGGVVQLQDVQKNLPKSCLDQLDPTSCFFPQNMIEHVETPLFLLNAAYDVWQVQASLAPPSADRLGSWNECKSNHANCSSSQMQFLQDFRNQMLGDIKDFSSSSQTGLFINSCFAHCQSERQETWFADDSPLIEDKPIAVAVGDWYFDREVVKAIDCAYPCDNSCHNLVFNFK* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1283 419 Pfam Pectinacetylesterase 47 397 IPR004963 GO:0016787
Gso10g1283 419 PANTHER PECTIN ACETYLESTERASE 2 417 - -
Gso10g1283 419 PANTHER NOTUM-RELATED 2 417 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1283 Gso-Chr10 38851771 38861676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1283 6 418 Carbohydrate Esterase AT3G62060 63.744 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1283 K19882 - gmx:100811787 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0058 2 696808 701431 Gso10g1283 10 38851771 38861676 GST
Gso19g1874 19 47457605 47463558 Gso10g1283 10 38851771 38861676 PCT
Gso3g1910 3 44653641 44659395 Gso10g1283 10 38851771 38861676 PCT
Gso10g1283 10 38851771 38861676 Gso19g1874 19 47457605 47463558 PCT
Gso10g1283 10 38851771 38861676 Gso3g1910 3 44653641 44659395 PCT