Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1260 ATGGCAACAAGCGAAGAAGTGGTTGCGGCGGCGCCGGAGGCAGCCGCGCCGGAGGCAGGGTTGAAGCACAAACTGGAGAGAAAATGGACGTTTTGGTGCGACAACCAATCCAAACCCAAGCAAGGCGCTGCTTGGGGAACCTCTCTTCGCAAGGTCTACACCTTCGACACCGTTGAAGAGTTCTGGTGTTTGTATGATCAGGTATTCAAGCCCAGCAAGTTGCAAATCAATGCCGATTTTCACTTGTTCAAGACTGGGATTGACCCTAAATGGGAAGATCCAGAGTGCGCCAATGGAGGAAAGTGGTCTATCACCAGCAACAGCGGCAGGAAGGCTAACCTTGATAACATGTGGCTTGAAACTATGATGGCTTTGATTGGGGAACAATTTGAGGATGCTGAGGACATATGTGGTGTGGTTGCTAGTGTGCGCCAGTGGCAGGACAAACTTTCGTTGTGGACAAAGACAGCAGCAAATGAAGCTGCCCAGGTTTTTTATTATCTTATGAGCATTGGAAGGAAGTGGAAGGAAATCATTGATGTTAACGACAAGATAACATACAACTTTCATGATGATTCTAGAAGCAAAGGAGCAACAAAGGGTCGGTACACCGTATAA 618 0.479 MATSEEVVAAAPEAAAPEAGLKHKLERKWTFWCDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLYDQVFKPSKLQINADFHLFKTGIDPKWEDPECANGGKWSITSNSGRKANLDNMWLETMMALIGEQFEDAEDICGVVASVRQWQDKLSLWTKTAANEAAQVFYYLMSIGRKWKEIIDVNDKITYNFHDDSRSKGATKGRYTV* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1260 205 ProSitePatterns Eukaryotic initiation factor 4E signature. 79 102 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Gso10g1260 205 SUPERFAMILY eIF4e-like 12 198 IPR023398 -
Gso10g1260 205 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 20 196 IPR001040 GO:0003723|GO:0003743|GO:0006413
Gso10g1260 205 PANTHER BNAA05G12740D PROTEIN 20 196 - -
Gso10g1260 205 Pfam Eukaryotic initiation factor 4E 24 186 IPR001040 GO:0003723|GO:0003743|GO:0006413
Gso10g1260 205 Gene3D RNA Cap, Translation Initiation Factor Eif4e 15 205 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1260 Gso-Chr10 38299774 38303375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1260 1 205 Eukaryotic Initiation Factors Gene Family AT5G35620 61.905 4.02e-84 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1260 K03259 - gmx:100499799 403.29