Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1249 ATGTTGCAGGATGTTATCCACCCCTCAACACCGGCTGAGCAACTCCCCATTGATGAGATTTCAAGCCCGATTAGTGCTCGAATTTTCGAACTTTGCGAGCCTGATTTCTTCCCAGACACACTGCAAAATTCAGATGTTACTTCCAGCTCAAATTGTTGCCATGAAGAGAAGTCCTCATATGCCACAACCATATCTCCACCTTTAGATTTAGTAGACAACAAGATCAATATCAATAACAATAGCAACATAGTCACTACTACCTCATCTAGCACTACCACAACCAGCACCACAACCAACAACAACAACAACAACACAACGAACAGCAATAACCTGTCCATCCTCTTTGACACTCAAGATGAAATTGACAATGACATCTCAGCCTCCATAGACTTCTCATCATGTCGATCTTTAGTTGTTCCACCACTTCTCTCAATCTCAACTCAGCAGGATCAGTTTGATTTCTCTTCAGCTCAGCCACAGGTGCAACTATCAGCAGCAGCAGGTTCAGTTTTGAAGGGCCTCTCTCACTACCCTACAGATCATGTGATTGCACCCCTTATTGGATCTCCGTTACCATCTGTTTTTGATGAAGATTGCATATCTTCCATCCCTTCTTATGTGCCTCTCAACCCATCATCACCCTCTTGCTCTTATCTCAGTCCTGGCATAGGAGTGTACATGCCTCCTCCTGGTTCCCTTAACACTGCCTTATCTGCTGACAGTTCTGGATTGTTTGGTGGGAACATTCTACTGGGGTCTGAACTGCAGGCACATGAATTGGACTATCAGGGAGAAAATGGTGGAATATTTTGCACAGATTCAATTCAGAGGGTGTTTAACCCCCCAGATCTTCAGGCACTTGGTACTGAGACTCAGAAACTTGTAGCTGGGGCTGGAAGTTCTGCCACTTTGACACCAGAAATCTCACACTTGGAGGACTCTAACTTGAAAGTTGGAAAACTCTCTGTTGAGCAGAGGAAGGAAAAGATTCATAGATACATGAAGAAGAGAAATGAAAGAAATTTCAGCAAGAAAATCAAGTATGCTTGCCGCAAAACTTTAGCAGATAGCCGGCCCCGGGTTAGAGGAAGGTTTGCAAAGAATGATGAGTTTGGAGAGAGCCATAGACAAGGAAGTAGCAATCATGAAGAAGATGATGAAGAAATAATTGTGAAAGAAGATGATGATATGGTTGATTCCTCAGATATCTTTGCACATATCAGTGGAGTGAACTCTTTCAAATGCAACTATTCCATCCAGTCCTTGATTTGA 1272 0.4308 MLQDVIHPSTPAEQLPIDEISSPISARIFELCEPDFFPDTLQNSDVTSSSNCCHEEKSSYATTISPPLDLVDNKININNNSNIVTTTSSSTTTTSTTTNNNNNNTTNSNNLSILFDTQDEIDNDISASIDFSSCRSLVVPPLLSISTQQDQFDFSSAQPQVQLSAAAGSVLKGLSHYPTDHVIAPLIGSPLPSVFDEDCISSIPSYVPLNPSSPSCSYLSPGIGVYMPPPGSLNTALSADSSGLFGGNILLGSELQAHELDYQGENGGIFCTDSIQRVFNPPDLQALGTETQKLVAGAGSSATLTPEISHLEDSNLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEFGESHRQGSSNHEEDDEEIIVKEDDDMVDSSDIFAHISGVNSFKCNYSIQSLI* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1249 423 MobiDBLite consensus disorder prediction 361 386 - -
Gso10g1249 423 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 17 423 - -
Gso10g1249 423 ProSiteProfiles CCT domain profile. 326 368 IPR010402 GO:0005515
Gso10g1249 423 MobiDBLite consensus disorder prediction 361 387 - -
Gso10g1249 423 PANTHER CCT MOTIF FAMILY PROTEIN 17 423 - -
Gso10g1249 423 Pfam CCT motif 326 368 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1249 Gso-Chr10 37539048 37543750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1249 326 384 C2C2-CO-like Transcription Factor Family AT5G57660 45.312 3.40e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso10g1249 CCT 5.6e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1249 - - gmx:100807304 766.918