Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1234 ATGTCGCTGCCTGCTTGTCCCGCCGAACAACTGGCCCAACTTCTCGGCCCAAACACCACAGACGCCTCCGCCGCCGCCTCCCTTATCTGCGGCCAGTTTGCCGCCGTGGACAGCAAGTTCGTCGACACGGCCTTCGCCGTCGACAACACCTACCTCCTCTTTTCCGCCTACCTCGTTTTTTCTATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGCGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTGGACGCTGCCGCCGGCGGCCTCTTCTACTACCTCTTCGGCTTCGCCTTCGCTTTCGGCTCCCCCTCCAACGGCTTCATCGGTAAACATTTCTTCGGCCTCAAGGACATCCCTTCTTCCTCCTACGACTACAGCTACTTCCTCTACCAATGGGCCTTCGCCATCGCCGCCGCCGGCATCACCAGCGGAAGCATCGCCGAACGCACACAGTTCGTGGCCTATCTCATCTACTCCTCCTTCCTCACCGGCTTCGTCTATCCGGTGGTCTCCCACTGGTTCTGGTCCCCAGACGGCTGGGCCTCTGCCTTTAAGATCACCGACCGGCTATTTTCCACCGGCGTAATAGACTTCGCCGGTTCCGGCGTAGTCCACATGGTCGGCGGAATAGCCGGCCTATGGGGAGCGCTGATCGAAGGCCCAAGAATGGGACGTTTCGATCATGCAGGACGAGCTGTGGCCTTGCGAGGCCACAGCGCGTCCTTAGTAGTCCTGGGAACCTTCTTGCTTTGGTTCGGTTGGTACGGATTTAACCCCGGTTCATTTAACAAAATCCTACTTACTTACGGTAACTCAGGAAATTACTACGGTCAATGGAGCGCGGTTGGCAGAACCGCGGTCACCACTACCCTAGCGGGGTCAACAGCTGCCTTGACCACGCTATTCGGTAAACGGGTGATATCCGGTCACTGGAACGTGACCGATGTCTGCAACGGGCTGTTAGGCGGTTTCGCGGCGATAACAGCCGGTTGCTCCGTGGTTGAGCCATGGGCAGCCATCGTATGCGGTTTTGTTGCTTCTATAGTATTAATAGCTTGCAACAAATTAGCAGAGAAGGTTAAGTTCGACGATCCTCTGGAGGCGGCGCAGTTGCACGGTGGGTGTGGCACGTGGGGGGTGATATTCACGGCGTTGTTCGCAAAAAAGGAGTATGTGAAGGAGGTTTACGGGTTGGGGAGGGCGCACGGGTTGCTCATGGGGGGTGGTGGGAAGTTGCTGGCGGCGCACGTGATTCAGATTCTGGTGATTGCTGGGTGGGTTAGTGCGACCATGGGACCCTTGTTTTGGGGGTTGAATAAACTGAAGCTGTTGAGGATTTCTTCAGAGGATGAGCTTGCGGGGATGGACATGACTCGCCATGGAGGCTTTGCTTATGCTTATGAGGATGATGAGACGCACAAGCATGGGATGCAGTTGAGGAGGGTTGGGCCCAACGCGTCTTCCACACCCACCACTGATGAATGA 1503 0.5695 MSLPACPAEQLAQLLGPNTTDASAAASLICGQFAAVDSKFVDTAFAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGSPSNGFIGKHFFGLKDIPSSSYDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASAFKITDRLFSTGVIDFAGSGVVHMVGGIAGLWGALIEGPRMGRFDHAGRAVALRGHSASLVVLGTFLLWFGWYGFNPGSFNKILLTYGNSGNYYGQWSAVGRTAVTTTLAGSTAALTTLFGKRVISGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVASIVLIACNKLAEKVKFDDPLEAAQLHGGCGTWGVIFTALFAKKEYVKEVYGLGRAHGLLMGGGGKLLAAHVIQILVIAGWVSATMGPLFWGLNKLKLLRISSEDELAGMDMTRHGGFAYAYEDDETHKHGMQLRRVGPNASSTPTTDE* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1234 500 SUPERFAMILY Ammonium transporter 47 452 - -
Gso10g1234 500 Pfam Ammonium Transporter Family 51 471 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gso10g1234 500 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Gso10g1234 500 Gene3D Ammonium transporter AmtB like domains 29 488 IPR029020 -
Gso10g1234 500 PANTHER AMMONIUM TRANSPORTER 5 493 - -
Gso10g1234 500 TIGRFAM amt: ammonium transporter 48 471 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gso10g1234 500 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 5 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1234 Gso-Chr10 37172056 37174341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1234 5 497 Inorganic Solute Cotransporters AT4G13510 81.113 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1234 K03320 - gmx:100796502 960.674