Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1229 ATGGCTACTCTGGCAAATTTTCGTCCTCCGTATTCAATACCAAATCCTCCTCCAGATGCAATACCAGAACTTGCATGTTACAATTCAACAATGGATCTTTCCAACAATATCTGGAGGGGTGGTAATGTCATTGGAGAACGTGTTCCTCTTTTGTCTATTCAAATTGCCTACAGTGTCCTGCTTTCCAGTATTTTTCACCGCATCTTCAAGTCATTCCACCTGCCTCTTATGGTTTCCCAGATTCTTAGTGGTGCTATTTTGAGTTCATCGTTGATGGGAAGAGTCCCTGGAATTTTTAACACGCTTTACCGTCCAGAAGGAATCCTTGCGGTTGAAACCTTTGCGAATCTTGGAGTTATGTACTATGTGTTCTTAAATGGATTGGAGATGAACTGTGACACGATTATAAGATCAAGCAAGAAGGCTATAACCATTGCTCTCGTTTGCATTCTGATTCCAATGTTGGGGGGTGCTGGTTTTCTTGCTCTAGAGCATAGGGTATCAGGAGGTTCAGCAAAGCCTACTGTTTCCACAAAAGGATATTTCTTTTGCTGTGCAATTCTTGCTGTCACAGGTTTTCCAGTCGTTGCTAGGCTCCTATCAGGGCTCAAGATCCTCTACACAAGGCTTGGCAAAGATGCCTTAACTGCAGCCATGTTAATTGATGCATATGGCTGGATTGTCTTCACAATCTTGATTCCTTATTCCCATGATCGCGGCGGAAAACCACTCCTCTCAGCAATATGCACCTTTTTGTTCATTGTGTTCTGCTTCTACGTGGTTCGTCCCATCCTGACTCTTATCATTAACCGCAAAATCAGGTTGGAGACATGGGACTCCTCAGGTTTGCTGGATGTTATGGTTGGACTTTTCATTTGTTCGTCCATCACAGATTTTCTTGGTGCACACCATGTTGTTGGGGCCTTTGTGTATGGACTCATTTTGCCTAGTGGCAAATTTGCTGATTTGATGATGGAAATCTTGGATGATGTTGTTACTGCTCTTATTGTTCCTATCTACTTTGCTAGTTTTGGCTTTAGACTACACCTTGAGGCACTTTGGGCTGTTCACAATTCGGTTTTGTTTCCTGTCCTCATGGTCTTGTTGTTAACCATCCCAAAGGTTTTAGGCTCTATGTTGGCTACTTTCTACTTTGGTATGTCTGCTAGAGATGGCTTGGGCCTTGGATTGCTCCTCAACACTAAGGGCATCATGGCTGTCATTATGCTCAGCGTTGCCTGGGACAAAAATCTTTTGGACCCCTATGCATTCACAATTATGATGCTGGCTATACTATTCATGACTGTGTTGGTCTCTCCCCTGATCAATGTGATATACAAGCCAAAACTCCGGTTCATGCAAACACAGCAAAGAACTGTACAGAAGCTAAGGAATGATGCAGAACTTCGAGTGGCTGTTTGTGTCCACAATGCTCACCAAGCCACTGGCATGATCCATGTCCTTGAAGCCACAAATGCCACCAGAATTTCGCCTTTACAAGTCTCAGTCCTTCACCTTGTTGAACTCACTAGACATGGCACTGGCCTTCTTGTTGCCCAGATGGACAATCCAAGTAGTGTTCAAGGAGAAAGCCATTATGGATCACAGGAAGAGTTTGAGAGCATATCCAAGGCGTTTGAAGAGTTTTCAGAGGAATACAATGCAGTGAGATTTGAGACATCAAGTATTGTGTCAACGTATGAGTCAATCCATGAGGACATATACACTGTGACACAAGAAAAACGTGCAAACCTAGTTCTCCTTCCCTTCCACAAACAACTAAGCTCCGAAGGCGTGTTGGACACAACCAACAATGCATTCAGTGGCATAAACCAAAATGTGATGCAACAACCACCTTGTTCTGTTGGGATCTTTGTGAACCGGGGACTCGACTCATTGTTGAAAACAAAAATGAGCATCATTATGATCTTCATTGGAGGGCCTGACGACCGCGAAGCCTTGTCGATCGCATGGAGAATGGCAGGGCATTCATGCACAATGTTGCATGTGGTGAGGCTTCTTCTGTCAGGCACTGAGGTTGCAGAAGAAGAAAAGGCATTCCATTCTGACTCTAATGGGTTGTTATCTACAGTGATGGACAGTGTGATGCAGAAAGAGTTGGATGATGAGCAAATATTGCACTTCAGGCACAAGGGGGTGCACAATAATGACTCCATTTCTTACTCAGAAAAGGAAGTGAAAATAGAAACTGGTGAGGAGATTCCTTTGATCCTCAATGAGATAGACAAGCCTGGGTATGACTTGTACATTTTGGGACAAGGGAGTGGCAAGAACTACACAGCTTTGCAGAAGTTGTTGGAATGGTGTGACAATCCTGAACTTGGGGCCATGGGGGACATTGTAGCTTCAACCAGCTTTGGCACAAGCTCCTCACTGCTTGTTGTGCAACAATACAGCATGGAGAGAAAGCCTAAAGGATATCGCAAAAAATGCTCTAAGAGAAATGATCCTGCCATATTGTGA 2484 0.4392 MATLANFRPPYSIPNPPPDAIPELACYNSTMDLSNNIWRGGNVIGERVPLLSIQIAYSVLLSSIFHRIFKSFHLPLMVSQILSGAILSSSLMGRVPGIFNTLYRPEGILAVETFANLGVMYYVFLNGLEMNCDTIIRSSKKAITIALVCILIPMLGGAGFLALEHRVSGGSAKPTVSTKGYFFCCAILAVTGFPVVARLLSGLKILYTRLGKDALTAAMLIDAYGWIVFTILIPYSHDRGGKPLLSAICTFLFIVFCFYVVRPILTLIINRKIRLETWDSSGLLDVMVGLFICSSITDFLGAHHVVGAFVYGLILPSGKFADLMMEILDDVVTALIVPIYFASFGFRLHLEALWAVHNSVLFPVLMVLLLTIPKVLGSMLATFYFGMSARDGLGLGLLLNTKGIMAVIMLSVAWDKNLLDPYAFTIMMLAILFMTVLVSPLINVIYKPKLRFMQTQQRTVQKLRNDAELRVAVCVHNAHQATGMIHVLEATNATRISPLQVSVLHLVELTRHGTGLLVAQMDNPSSVQGESHYGSQEEFESISKAFEEFSEEYNAVRFETSSIVSTYESIHEDIYTVTQEKRANLVLLPFHKQLSSEGVLDTTNNAFSGINQNVMQQPPCSVGIFVNRGLDSLLKTKMSIIMIFIGGPDDREALSIAWRMAGHSCTMLHVVRLLLSGTEVAEEEKAFHSDSNGLLSTVMDSVMQKELDDEQILHFRHKGVHNNDSISYSEKEVKIETGEEIPLILNEIDKPGYDLYILGQGSGKNYTALQKLLEWCDNPELGAMGDIVASTSFGTSSSLLVVQQYSMERKPKGYRKKCSKRNDPAIL* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1229 827 Pfam Sodium/hydrogen exchanger family 59 440 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso10g1229 827 Gene3D - 50 454 IPR038770 -
Gso10g1229 827 PANTHER CATION/H + ANTIPORTER 22 813 - -
Gso10g1229 827 PANTHER CATION/H(+) ANTIPORTER 21-RELATED 22 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1229 Gso-Chr10 36999384 37003035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1229 18 805 Antiporter Super Family AT2G13620 34.717 1.67e-160 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1229 - - gmx:100792990 1615.9