Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1197 ATGCATGACATATGTCTGAACATGCCACCAATGGTTCAAACCTTCGACCCAGAGGACCTGTTCAAAAGGCGTTGCATATGGGTGAACGGACCCGTTATAGTAGGTGCTGGCCCTTCAGGTCTTGCAGTGGCAGCATGCCTCAAAGAGCAAGGTGTTCCATTCTTAATCCTCGAGAGAGCAAACTGCATTGCCTCTCTTTGGCAAAACCGCACCTACGATCGCTTAAAGCTTCATCTCCCAAAACAGTTTTGTCAATTACCAAACTTCCCTTTCCCTGAGGACTTCCCTGAATACCCCACAAAGTTTCAGTTCATAAGCTACCTTGAAAGCTATGCAAAGCACTTCAACATTTCCCCACAGTTCAATGAAACAGTGCAGTCTGCAAAGTATGATGAGACCTTTGGCCTCTGGAGGGTCAAAACCATCAGGAAGATCAAGAAGTTAGGAGAAGCCTCTTCAGGTTGTTGTGGTGCTGTTGAGTGTGAAGTTGAGTACATTTGCAGGTGGCTTGTCGTCGCCACCGGCGAAAACTCGGAGAAAGTGGTGCCTGAGTTTGAAGGGTTGGGAGAGTTTGGTGGCCATGTTATGCATGCTTGTGACTATAAATCTGGGGAGGGATATGGTGGGCAAAAAGTGCTTGTTGTTGGGTGTGGAAATTCAGGCATGGAGGTCTCACTGGATCTTTGTAACCACAATGCTAACCCATCAATGGTGGTTAGAAGCTCAGTTCATGTGTTGCCAAGAGAAGCTTTTGGGAAATCTACCTTTGAGCTTGCTGTGATGTTGATGAAACGGTTTCCTCTATGGATGGTTGATAAGATATTGCTGGTTCTGGCACGTTTGATTTTGGGGAATGTTGAAAAGTATGGTCTAAAAAGGCCTTCAGTGGGTCCTTTGGAGCTCAAGCACACTGCAGGGAAGACCCCTGTGTTGGACATTGGGGCCCTTGAGAAAATTAGATCTGGCAAAATCAAAGTGGTTCCTGGAATCAGAAGGTTCTTCCCAGGGAAAGTTGAACTTGTTGATGGCCAAGTTCTTCAGATTGATTCTGTGGTTCTTGCAACTGGGTATCACAGCAATGTACCATCATGGTTGAAGGAGAATGATTTTTTTACCAGTGATGGGACTCCAAGGAACCCATTTCCAAATGGGTGGAGAGGCAAAGGTGGTCTTTATGCTGTAGGGTTCACAAGGAAAGGTCTTTCTGGTGCATCATTGGATGCAATTAATGTGGCTCATGACATTGCCAAGAATTGGAAAGAGGAAAACAAACAGAAGAGGAAAACAGTGGCTGCACGCCACAGGAGATGCATATCACACTTCTAA 1326 0.4585 MHDICLNMPPMVQTFDPEDLFKRRCIWVNGPVIVGAGPSGLAVAACLKEQGVPFLILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPEYPTKFQFISYLESYAKHFNISPQFNETVQSAKYDETFGLWRVKTIRKIKKLGEASSGCCGAVECEVEYICRWLVVATGENSEKVVPEFEGLGEFGGHVMHACDYKSGEGYGGQKVLVVGCGNSGMEVSLDLCNHNANPSMVVRSSVHVLPREAFGKSTFELAVMLMKRFPLWMVDKILLVLARLILGNVEKYGLKRPSVGPLELKHTAGKTPVLDIGALEKIRSGKIKVVPGIRRFFPGKVELVDGQVLQIDSVVLATGYHSNVPSWLKENDFFTSDGTPRNPFPNGWRGKGGLYAVGFTRKGLSGASLDAINVAHDIAKNWKEENKQKRKTVAARHRRCISHF* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1197 441 SUPERFAMILY FAD/NAD(P)-binding domain 210 420 IPR036188 -
Gso10g1197 441 PRINTS FAD-dependent pyridine nucleotide reductase signature 31 50 - -
Gso10g1197 441 PRINTS FAD-dependent pyridine nucleotide reductase signature 167 185 - -
Gso10g1197 441 PRINTS FAD-dependent pyridine nucleotide reductase signature 211 229 - -
Gso10g1197 441 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 15 439 - -
Gso10g1197 441 Pfam Flavin-binding monooxygenase-like 33 362 IPR020946 GO:0004499|GO:0050660|GO:0050661
Gso10g1197 441 PRINTS Pyridine nucleotide disulphide reductase class-I signature 30 52 - -
Gso10g1197 441 PRINTS Pyridine nucleotide disulphide reductase class-I signature 170 179 - -
Gso10g1197 441 PRINTS Pyridine nucleotide disulphide reductase class-I signature 211 236 - -
Gso10g1197 441 SUPERFAMILY FAD/NAD(P)-binding domain 32 248 IPR036188 -
Gso10g1197 441 Gene3D - 30 427 IPR036188 -
Gso10g1197 441 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 15 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1197 Gso-Chr10 35951584 35954312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1197 K11816 - gmx:100818345 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1420 19 43098392 43100610 Gso10g1197 10 35951584 35954312 PCT
Gso3g1428 3 40271930 40274324 Gso10g1197 10 35951584 35954312 PCT