Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1174 ATGGGGAAGCGAATTTGCGAGAAAGAATGTGCATTGTCTAATGGAAATAGCCATCACACTCATCCAGGACGAGTATGGGGAATGCTTCACGTTATAAGGTACCATCATTGGCGTCAGGTCAAGAGAAGGCTTACACACAGGAGGCATGGTGGTGAAAGACTTGATGCTAGTACTAGAGCTGGAATTCCAGGAACTTCTGATGATTCTGGGGTTCACTCTATGGGAGAACATGATAAGCCACATACAGAACTATCTAATGTTGAAGAAGAGCTGGTACACTCCTCTCAGCCTGCCAAAAATTCCATCAAATCCAGATTAAGGTCACTTCTTAATGAAGATATATACAGAAAGAAGGGTCGACACAAGAGAAGCTCAACCTGCCCTGCAAAGTCGCAACTAACTCAAGCTGTTTCTGTTCACAACATAGAGGTTGATCCACTTAGTGAATTGTTACTGAATGTTCAGAGCCCTGAACCAGTCCTAGAAACCTTTCAAAACCGTCTTGCTGCTGGCACATTGGATGTGTTGTCACCAGTTTTCTCCGAGAAACCAATTGCCAACAATGACAAATGTGTAGATTGTGGAACAATGTTTTCTAAAGACATTTTGGATCATAGCAAGATTCATAAGCACTTTTGCTCTCCTAGTCAAGGTGGTCCTGAAAAGAAGTCGATGAATGCACAGATACTTACAACTGATGCTTCACCCCATCTTTTCAAGGACTTTCTTGATGCATTGGATGTGATCAACACAAACAAGGACTTCCTATTAGAACATATACAGGATCCAGGCTCTCCTTTGCCATTCCACACTCACAATCAACAGTCTTTCAATGGTAAACAGAGACGATCCAAATCTCTCTCATTTCCTGTATCAGCCTCATCGTCAGGAAGCCAAGATTCTGTTCATGGCCAACTCATAAACCAAATGGTAGATGATTGGTTGGATTCAGAAGAAGAGAAGTTACAAAATCAAAGTAACATGCAAAATACAAGCATGGATGAGTCCTCAGAAGATTCTTACCAACAGACCATTCCATCAGGTTCTTCAAATAATTTTGATCAATGGGGTGAAAGAGATTCTAATTCTTCATCAGTTTCGTCTCAGGTTCCCAACAATGTGAAAACTAGGCATTTCAGGAATCTTAGAAAGAAGATGAGGCACATAATTGATGATGGAAGAAATGAAAAGCATCGCATTACCATGGATGCTATACTTGACAAAATTCCTAGCGGAAAGAGGCTCACCAAAAATGTGAAGAAGTTTATCCATGACAAATCCAAAAACCCCACAATTAAAGGGGAAGGTGAAGACAGTGCAACAAGAGGTTTTGGTAGCCGTCTCTCGTCTAATTCCTTCAACAAGCATCAACCACCACCCATGAGGAATTCATCTCTAAAAGATTCAGCTGGTAGATATTCTCAGTTGTATCATCAGACTTGTTTTAACAGTGAAGCCAAGTATCCTAAGACTGAGAACTTAAGATTGAGAACAGAAGAGAGAAATTCTATATTAAAGACCCCAAAATCCTTTAAAAGGTTTCTTTCAATGCCTAATTTAAAATCTTACTTTCACCAGAATGAGGAGCTGCCTTTACCTTTATCCCCCCAGAGTTCAATCAAGAAATCTGGAGATAGAACCACTAAATTTAAATCTTACTTTCACCAGAATGAGGAGATGCCTTTACTTTTATCCCCCCAGAATTCAATCAAGAAATCTGGAGATAGAACCACAAGCACAAATGTCATTGATCAGCAGCAAAGTTGGTTTGACCATAATGATGATTCAAAGAGTCAAATTTTGCCACCTACATTTGCTGATAACACAAATCAAGAATGTAGTTTGAATGCTGACCAAAAGCAACTTCTTGTCAGGAGTGCTTCAAAATCAGGAATAGATTTTAGTACCGAGGAAAAGGCAGATAAGAGCATACGAATTGAAGGTTTTGGTGACTTGAGAGACAGTGAACATGACATTGGAGCTGAAACAGAATCTGTTTCTGTGCCAGCGGAAGCAAACTCAGTCTTCTCTTCTGACACCAGCTTTCTAGATTTTACATTTGATCTTGAGAACTTAAACATACAGGAAGAAGAATCAGACACAGAAATAAAGCCAGTGCAAGATGATGGATTAGATGATATGGCTGAGCAACAAGAGGCTAAGGAGGATCACCCTGAGGAGGTTGAGAATTTTCAAAACATTGGAACTTTAAGCAAGCGTTTCAACTATGAAATTCCATGTATTGAAGTGGATCCAAGTAATGAAGCTGCATTTAATTATGTGAGAAAGGTTTTAGAGCTCTCTGGGTTCACTGGCCATGATTCCCTTGGGATATGGTATTCTGATAACCAACCACTTGATCCTTCAATGTATGAAGAATTGGAGGGGTGCTTGCTTCTTGATCCTGATTGTTCTGGTAATAGTGGTGAAGGTGGAGAATGTAATCATCATCTGCTTCTGTTTGATATAATCAATGAAGGGTTGTTGGAGATTTTTGGCAGATCATACAACTATTATCCAAGACCCTTGTCTTATCTCTCCCATGTTCATCCACTTCCAGCAGGAGAAAATGTTCTCTATAAAGTGTGGACACTCATTAGCTGGTATCTGATGAACTCAACAACATATGAGCTTTATCCGTCATTGGATTATTATGTGAGCAAAGATCTTGCAAAATATGATGGGTGGATGAATCTCCAATTTGATTCTGAATGTGTGGGGCTTGAGCTAGATGACTTGATTTTTGATGATCTATTGGAGGAAATAATCTCCACCTAA 2778 0.397 MGKRICEKECALSNGNSHHTHPGRVWGMLHVIRYHHWRQVKRRLTHRRHGGERLDASTRAGIPGTSDDSGVHSMGEHDKPHTELSNVEEELVHSSQPAKNSIKSRLRSLLNEDIYRKKGRHKRSSTCPAKSQLTQAVSVHNIEVDPLSELLLNVQSPEPVLETFQNRLAAGTLDVLSPVFSEKPIANNDKCVDCGTMFSKDILDHSKIHKHFCSPSQGGPEKKSMNAQILTTDASPHLFKDFLDALDVINTNKDFLLEHIQDPGSPLPFHTHNQQSFNGKQRRSKSLSFPVSASSSGSQDSVHGQLINQMVDDWLDSEEEKLQNQSNMQNTSMDESSEDSYQQTIPSGSSNNFDQWGERDSNSSSVSSQVPNNVKTRHFRNLRKKMRHIIDDGRNEKHRITMDAILDKIPSGKRLTKNVKKFIHDKSKNPTIKGEGEDSATRGFGSRLSSNSFNKHQPPPMRNSSLKDSAGRYSQLYHQTCFNSEAKYPKTENLRLRTEERNSILKTPKSFKRFLSMPNLKSYFHQNEELPLPLSPQSSIKKSGDRTTKFKSYFHQNEEMPLLLSPQNSIKKSGDRTTSTNVIDQQQSWFDHNDDSKSQILPPTFADNTNQECSLNADQKQLLVRSASKSGIDFSTEEKADKSIRIEGFGDLRDSEHDIGAETESVSVPAEANSVFSSDTSFLDFTFDLENLNIQEEESDTEIKPVQDDGLDDMAEQQEAKEDHPEEVENFQNIGTLSKRFNYEIPCIEVDPSNEAAFNYVRKVLELSGFTGHDSLGIWYSDNQPLDPSMYEELEGCLLLDPDCSGNSGEGGECNHHLLLFDIINEGLLEIFGRSYNYYPRPLSYLSHVHPLPAGENVLYKVWTLISWYLMNSTTYELYPSLDYYVSKDLAKYDGWMNLQFDSECVGLELDDLIFDDLLEEIIST* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1174 925 MobiDBLite consensus disorder prediction 267 304 - -
Gso10g1174 925 MobiDBLite consensus disorder prediction 320 372 - -
Gso10g1174 925 MobiDBLite consensus disorder prediction 89 103 - -
Gso10g1174 925 PANTHER PROTEIN TRM32 550 925 IPR044257 -
Gso10g1174 925 PANTHER PROTEIN TRM32 1 549 IPR044257 -
Gso10g1174 925 MobiDBLite consensus disorder prediction 427 468 - -
Gso10g1174 925 Pfam Domain of unknown function (DUF4378) 758 921 IPR025486 -
Gso10g1174 925 MobiDBLite consensus disorder prediction 266 304 - -
Gso10g1174 925 MobiDBLite consensus disorder prediction 443 468 - -
Gso10g1174 925 Pfam Protein of unknown function (DUF3741) 222 265 IPR022212 -
Gso10g1174 925 PANTHER TRM32-LIKE PROTEIN (DUF3741) 550 925 - -
Gso10g1174 925 PANTHER TRM32-LIKE PROTEIN (DUF3741) 1 549 - -
Gso10g1174 925 MobiDBLite consensus disorder prediction 321 372 - -
Gso10g1174 925 MobiDBLite consensus disorder prediction 45 103 - -
Gso10g1174 925 MobiDBLite consensus disorder prediction 71 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1174 Gso-Chr10 35368442 35373687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1174 655 915 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 42.697 1.29e-55 205